Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j13
         (344 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    31   0.30 
AE014297-1358|AAF54682.3|  895|Drosophila melanogaster CG6834-PA...    30   0.70 
AY113442-1|AAM29447.1|  803|Drosophila melanogaster RE28849p pro...    30   0.93 
AY071446-1|AAL49068.1|  803|Drosophila melanogaster RE52979p pro...    30   0.93 
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    28   2.8  
AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p pro...    28   3.7  
AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-P...    28   3.7  
AY070944-1|AAL48566.1|  891|Drosophila melanogaster RE03989p pro...    27   8.7  
AE014297-1357|AAF54681.1|  891|Drosophila melanogaster CG6830-PA...    27   8.7  

>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
            protein.
          Length = 3539

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 67   HPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKEVIQE 201
            H +P  A+    E++  K  K + +++R+I +D T   + E IQE
Sbjct: 1193 HQSPAAAVVAEKERVQPKTPKRKAVSRRIIKMDATPETLAEPIQE 1237


>AE014297-1358|AAF54682.3|  895|Drosophila melanogaster CG6834-PA
           protein.
          Length = 895

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = -3

Query: 192 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 13
           +LF  I++++H+DY   YF  F+    E     L+          +   H++   H S A
Sbjct: 349 DLFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLDLLGFTGKQPSLRELHMLMYKHGSWA 408


>AY113442-1|AAM29447.1|  803|Drosophila melanogaster RE28849p
           protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = -3

Query: 192 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 13
           +LF  I++++H+DY   YF  F+    E     L           +   H++   H S A
Sbjct: 257 DLFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316


>AY071446-1|AAL49068.1|  803|Drosophila melanogaster RE52979p
           protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = -3

Query: 192 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHFSLA 13
           +LF  I++++H+DY   YF  F+    E     L           +   H++   H S A
Sbjct: 257 DLFYLILTSVHIDYKLDYFEYFIRHYHEQLTQHLGLLGFTGKQPSLRELHMLMYKHGSWA 316


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 127  KIRKIAKRVIDVDCTHNVVKEVIQE 201
            K RKI KRV+ +D   ++ +EV++E
Sbjct: 8252 KTRKIIKRVVIIDGKEHITEEVVEE 8276


>AY089288-1|AAL90026.1|  598|Drosophila melanogaster AT08391p
           protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = +1

Query: 4   RHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR--VIDVD 165
           R++ K K ++   +EVL Y   + + L A +C N K  D   K+R +AKR  ++D+D
Sbjct: 274 RNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRMEILDLD 327


>AE014296-3315|AAF49042.1|  598|Drosophila melanogaster CG17122-PA
           protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = +1

Query: 4   RHFRKRKMRFEDDMEVL-YDGVHPNPLLAIQCINEKLYDKHYKIRKIAKR--VIDVD 165
           R++ K K ++   +EVL Y   + + L A +C N K  D   K+R +AKR  ++D+D
Sbjct: 274 RNYEKLKAKY---VEVLRYKKAYESLLQAEKCENVKQKDAAGKLRTLAKRMEILDLD 327


>AY070944-1|AAL48566.1|  891|Drosophila melanogaster RE03989p
           protein.
          Length = 891

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 192 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTL 91
           +L  +I+S++ +DY  S+F  F+    E  V  L
Sbjct: 334 DLLYFIISSVQIDYKLSHFDFFIRHYQEALVKHL 367


>AE014297-1357|AAF54681.1|  891|Drosophila melanogaster CG6830-PA
           protein.
          Length = 891

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 192 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTL 91
           +L  +I+S++ +DY  S+F  F+    E  V  L
Sbjct: 334 DLLYFIISSVQIDYKLSHFDFFIRHYQEALVKHL 367


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,595,537
Number of Sequences: 53049
Number of extensions: 181247
Number of successful extensions: 735
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)