Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11j13
(344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58749-2|AAK18876.1| 355|Caenorhabditis elegans Hypothetical pr... 33 0.073
AL023835-6|CAA19483.1| 144|Caenorhabditis elegans Hypothetical ... 30 0.51
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 29 0.89
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 2.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 2.1
U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical pr... 28 2.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 2.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 2.1
AF101316-4|AAC69229.2| 296|Caenorhabditis elegans Serpentine re... 28 2.1
Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF016419-1|AAG24051.1| 499|Caenorhabditis elegans Hypothetical ... 27 3.6
AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical ... 27 3.6
Z82284-2|CAB05290.1| 402|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z82086-5|CAB04992.2| 325|Caenorhabditis elegans Hypothetical pr... 26 6.3
Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical p... 26 6.3
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 26 6.3
Z78200-6|CAB01585.2| 524|Caenorhabditis elegans Hypothetical pr... 26 6.3
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 26 6.3
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 26 6.3
U80028-9|AAN73867.1| 372|Caenorhabditis elegans Serpentine rece... 26 6.3
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 26 6.3
AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical ... 26 6.3
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 26 8.3
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 26 8.3
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 26 8.3
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 26 8.3
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 26 8.3
>U58749-2|AAK18876.1| 355|Caenorhabditis elegans Hypothetical
protein B0496.5 protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.073
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -3
Query: 243 YILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVH 64
+++ +HV +L F + I+ + +SYF N+ +FI+ F +T QG WV
Sbjct: 88 FLITDYLHVLLLAAFAIDRLIQIIFPVSYGKFYSYFINWKLFILLIFASTGLSVQG-WVF 146
Query: 63 TVIEHFH 43
+ F+
Sbjct: 147 PLDSRFN 153
>AL023835-6|CAA19483.1| 144|Caenorhabditis elegans Hypothetical
protein Y37A1B.6 protein.
Length = 144
Score = 29.9 bits (64), Expect = 0.51
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -3
Query: 222 HVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVN---TLNCQQGIWVHTVIE 52
+ F+L YF N+FN + IH TF ++F F++E + + N + ++ H+V
Sbjct: 23 YCFMLHYFGKNMFNSNFADIH--NTFLMVASFEQFVLEGYYSIDRASNFPENLYFHSVTG 80
Query: 51 HFHVVFKAH 25
+V K H
Sbjct: 81 --KIVHKPH 87
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 29.1 bits (62), Expect = 0.89
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = -3
Query: 243 YILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIV 112
YI+ ++ FI+ + F +I ++++DY+ ++FS + F++
Sbjct: 98 YIISSLASAFIIDSRTLSGFYFIQPSLYLDYSSNFFSVAITFLM 141
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 267 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 145
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 267 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 145
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical
protein D2096.5 protein.
Length = 137
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 225 IHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTL 91
+HV +L F++ LF+ + + + F+ F + + V+FFV L
Sbjct: 4 LHVSLLSVFIFLLFSSEVEALVTTFHFNGFLSCGLSTVDFFVQKL 48
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 267 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 145
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -3
Query: 267 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 145
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>AF101316-4|AAC69229.2| 296|Caenorhabditis elegans Serpentine
receptor, class sx protein8 protein.
Length = 296
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -3
Query: 279 IKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFI 115
+K I+FI + Y+ + +I+ FIL + + N ++ I + S+ F I
Sbjct: 204 LKFSAIIFIISNYLSVFVINAFILYGYAGDELNGVIGNISIFSMISFTHTFYTII 258
>Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical
protein C35D6.9a protein.
Length = 304
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 279 IKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFS 142
I +F +F+ K ++I+ +F +N+F+ + + +HV FS
Sbjct: 152 IFIFVFIFVDAKEESNGFKTIYIVIFFTFNIFSILSAILHVPMYFS 197
>AF016419-1|AAG24051.1| 499|Caenorhabditis elegans Hypothetical
protein F07G11.4 protein.
Length = 499
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 82 LAIQCINEKLYDKHYKIRK 138
L ++C NEK YD +Y RK
Sbjct: 425 LVLKCYNEKYYDLYYSNRK 443
>AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical
protein T21G5.2 protein.
Length = 109
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 246 KYILITIIHVFILQYFLYNLFNYI-MSTIHVDYTFSYFSNF 127
++++ T IH+F L+N F +I +S V +FS F F
Sbjct: 35 QFVIFTYIHIFSYLCVLFNYFLFIDLSISTVIVSFSRFIKF 75
>Z82284-2|CAB05290.1| 402|Caenorhabditis elegans Hypothetical
protein T27E7.3 protein.
Length = 402
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 282 TIKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMF 118
TIK YI I Y+L ++ + YF+ ++ + T ++ FS S F +F
Sbjct: 223 TIKTLYICCIIRDYVLSPVVACVSVIYFIGSI---SIETFSLETLFSLKSQFTIF 274
>Z82086-5|CAB04992.2| 325|Caenorhabditis elegans Hypothetical
protein ZK228.5 protein.
Length = 325
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = -3
Query: 255 IRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQG 76
++ ++ + I VFI F+ YI+ +++DY ++ +N I F L+
Sbjct: 232 LQKQFFVALCIQVFIPLVFISIPVAYIILAVYLDY-YNQAANNSALIAIAFHGILSTLTM 290
Query: 75 IWVHTVIEHFHVVF 34
+ VHT H + F
Sbjct: 291 LIVHTPYRHATLEF 304
>Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical
protein F36G9.6 protein.
Length = 323
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 264 ILFIRNKYILITIIHVF-ILQYFLYNLFNYIMST-IHVDYTFSYFSNFVMFIVEFF 103
+ F+ YI T++ VF IL FL + ++ + T S+F + + FI +FF
Sbjct: 30 LAFVPILYIPATVVVVFHILSKFLTEYYERNVNVQLFGVITLSHFMSLLFFIADFF 85
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 163 DCTHNVVKEVIQEVL*NKNMYNSY*YVFIS 252
+C+H++ K IQ L +NMY+ + ++S
Sbjct: 221 NCSHDIPKTAIQMALDLRNMYSDFPLPYLS 250
>Z78200-6|CAB01585.2| 524|Caenorhabditis elegans Hypothetical
protein T04H1.8 protein.
Length = 524
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 192 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHF 22
N N ++STI Y+ + NF F + NTL + V F VF HF
Sbjct: 452 NAENLLISTIEATYSTEFPPNFSKFPKNYHPNTLVRLIDSSIALVFMLFIFVFVNHF 508
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 ERHFRKRKMRFEDDMEVLYDGVHP-NPLLAIQCINEKLYDKHYKIRKIAKRVI 156
E F+ +++ F D + LYDG PL+A N+KL + + + K++K +I
Sbjct: 649 ENMFKLKEVFFNDPLNYLYDGCADFVPLVACFIANKKLTYETF-MEKMSKYLI 700
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 1 ERHFRKRKMRFEDDMEVLYDGVHP-NPLLAIQCINEKLYDKHYKIRKIAKRVI 156
E F+ +++ F D + LYDG PL+A N+KL + + + K++K +I
Sbjct: 649 ENMFKLKEVFFNDPLNYLYDGCADFVPLVACFIANKKLTYETF-MEKMSKYLI 700
>U80028-9|AAN73867.1| 372|Caenorhabditis elegans Serpentine
receptor, class w protein117 protein.
Length = 372
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 240 ILITIIHVFIL--QYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNT 94
ILI I+HVFIL + + N +M+ + + F F+NF + F NT
Sbjct: 50 ILINIVHVFILTRKPMRTSSINILMAAVAL---FDIFTNFQQIEIIFERNT 97
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 234 ITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNF 127
I + H YFL++L+ I ++ FSY+ F
Sbjct: 183 IVLFHWNACLYFLFSLYEGITEESQTEFGFSYYKVF 218
>AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical
protein T15B7.11 protein.
Length = 355
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 252 RNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFI-VEFFVNT 94
R+ ++ TI+ VF++ +F+ I +DY +Y+ N +F+ V F NT
Sbjct: 260 RSSQLIQTILIVFLITEVPQGVFSIIGGIEVIDY-LNYYQNLTIFMNVLSFFNT 312
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -3
Query: 273 LFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFV 100
LF +R K +++T +++++ +YN +S + VD +S+ N + + +FV
Sbjct: 350 LFKTPNLRRKTLIVT--YIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFV 405
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -3
Query: 273 LFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFV 100
LF +R K +++T +++++ +YN +S + VD +S+ N + + +FV
Sbjct: 333 LFKTPNLRRKTLIVT--YIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFV 388
>Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical
protein F44E5.2 protein.
Length = 820
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 231 TIIHVFILQYFLYNLFNYIMSTIHVD 154
T+ H + L+ LFN+I S+ H+D
Sbjct: 314 TLKHDVFMSQCLHALFNFIKSSYHID 339
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 228 IIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFV 124
IIHV Q FL LFN + H D +++F + +
Sbjct: 1424 IIHV---QKFLIYLFNQVDEICHCDLVYTFFHSIL 1455
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 228 IIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFV 124
IIHV Q FL LFN + H D +++F + +
Sbjct: 1424 IIHV---QKFLIYLFNQVDEICHCDLVYTFFHSIL 1455
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -3
Query: 273 LFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFV 100
LF +R K +++T +++++ +YN +S + VD +S+ N + + +FV
Sbjct: 333 LFKTPNLRRKTLIVT--YIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFV 388
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 82 LAIQCINEKLYDKHYKIRK 138
L ++C NEK YD Y RK
Sbjct: 455 LVLKCYNEKYYDLFYNNRK 473
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 264 ILFIRNKYILITIIHVFI--LQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEF 106
++F+ + + +I++ +F YF + + N+ +S I + SYF + V ++ +
Sbjct: 413 LIFLEHVFWVISLNTLFTATFAYFPFRIGNWFLSVIGLHGKISYFPSIVAMLLGY 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,795,279
Number of Sequences: 27780
Number of extensions: 106429
Number of successful extensions: 424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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