Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j12
         (279 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   3.8  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   5.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         21   6.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         21   6.6  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    21   6.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    21   6.6  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 92  HSSRCVVWATMPKHIRPNEE 33
           H + CV+   MP HI  +E+
Sbjct: 811 HDAACVIAGMMPLHILIDED 830


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 205 RLECIRKTIKHVLKIIKLYFV 267
           R E + +T +H+ K ++LY++
Sbjct: 360 RNEVVEQTRRHIGKGVRLYYI 380


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -1

Query: 114 WAYSFNSSFQSVCGMGDDAKTYPSKRGESKERRGR 10
           W Y    S +   G        P KR +S+E+R R
Sbjct: 468 WVYCTRYSDRPSSGPRYRRTKQPKKRADSEEKRPR 502


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -1

Query: 114 WAYSFNSSFQSVCGMGDDAKTYPSKRGESKERRGR 10
           W Y    S +   G        P KR +S+E+R R
Sbjct: 468 WVYCTRYSDRPSSGPRYRRTKQPKKRADSEEKRPR 502


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 120 WLWAYSFNSSFQSVC 76
           W W   F+S F  +C
Sbjct: 127 WAWYIMFHSIFAQIC 141


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = +2

Query: 20  RSLDSPRLDGYVLASSPIP----HTDWNEELKLYAQS 118
           R+L+     GY+L S  I     HT + ++LKL+A++
Sbjct: 687 RTLNQQCNFGYLLKSEEISTRITHTFFMDDLKLFAET 723


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,663
Number of Sequences: 2352
Number of extensions: 2865
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 16604898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)