Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j08
         (218 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129459-1|AAM76201.1|  373|Drosophila melanogaster RH08077p pro...    27   4.7  
AE014296-2909|AAF49343.1|  373|Drosophila melanogaster CG3874-PA...    27   4.7  
AE014296-2986|AAF49285.1|  742|Drosophila melanogaster CG5485-PA...    26   8.2  
AB062677-1|BAB62105.1|  373|Drosophila melanogaster UDP-sugar tr...    26   8.2  

>AY129459-1|AAM76201.1|  373|Drosophila melanogaster RH08077p
           protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -3

Query: 174 NFDNFSDTMFIIAFLLLC 121
           NF+ ++D++F++ FLL C
Sbjct: 267 NFEQWNDSVFVVQFLLSC 284


>AE014296-2909|AAF49343.1|  373|Drosophila melanogaster CG3874-PA
           protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -3

Query: 174 NFDNFSDTMFIIAFLLLC 121
           NF+ ++D++F++ FLL C
Sbjct: 267 NFEQWNDSVFVVQFLLSC 284


>AE014296-2986|AAF49285.1|  742|Drosophila melanogaster CG5485-PA
           protein.
          Length = 742

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 186 VKKPNFDNFSDTMFIIAFLLLC*NFVVLKIQFPKTC 79
           V + N  NF   M +IAF+++C    +LK +  K C
Sbjct: 308 VPQTNLVNFGFCMAVIAFMMICNE--ILKPRLSKKC 341


>AB062677-1|BAB62105.1|  373|Drosophila melanogaster UDP-sugar
           transporter protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 174 NFDNFSDTMFIIAFLLLC 121
           NF  ++D++F++ FLL C
Sbjct: 267 NFGQWNDSLFVVQFLLSC 284


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,338,389
Number of Sequences: 53049
Number of extensions: 101913
Number of successful extensions: 154
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 24,988,368
effective HSP length: 52
effective length of database: 22,229,820
effective search space used: 444596400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)