Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j08
         (218 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical pr...    27   1.4  
AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine r...    26   3.2  
U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical pr...    25   5.5  
U23449-2|AAC24297.2|  375|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AL023856-2|CAA19567.1|  327|Caenorhabditis elegans Hypothetical ...    25   5.5  
AF016676-8|AAG24105.1|  502|Caenorhabditis elegans Hypothetical ...    25   5.5  
Z47358-3|CAA87430.1|  127|Caenorhabditis elegans Hypothetical pr...    25   7.3  

>Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK669.4 protein.
          Length = 448

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 98  IFKTTKFQHSSKNAIINIVSEKLSKLG 178
           IFK  K  H+SK A + +V  KLS +G
Sbjct: 13  IFKLNKHLHTSKVAFMPVVQFKLSDIG 39


>AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 12 protein.
          Length = 341

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 165 NFSDTMFIIAFLLLC*NFVVLKIQFPKT 82
           N ++T+F++AFL++   F +L  QF +T
Sbjct: 162 NKNNTIFVVAFLMILNLFALLTNQFLRT 189


>U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical
           protein T20D4.9 protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 216 FFFNFHYFYYVKKPNFDNFS 157
           +FF  HY Y  KK N + FS
Sbjct: 76  YFFETHYEYIKKKNNSEKFS 95


>U23449-2|AAC24297.2|  375|Caenorhabditis elegans Hypothetical
           protein K06A1.2 protein.
          Length = 375

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 216 FFFNFHYFYYVKKPNFDNFSDTMFIIAFLLL 124
           F F+F  F YVK   + N    +F+  F L+
Sbjct: 116 FIFDFSLFIYVKDRKYINKFGALFLAIFKLI 146


>AL023856-2|CAA19567.1|  327|Caenorhabditis elegans Hypothetical
           protein Y94A7B.5 protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +2

Query: 77  VHVFGN*--IFKTTKFQHSSKNAIINI 151
           +H+FG    +FKT +  HS+K A+ N+
Sbjct: 26  IHLFGGFCILFKTPEIMHSTKWALFNL 52


>AF016676-8|AAG24105.1|  502|Caenorhabditis elegans Hypothetical
           protein F41B5.9 protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -3

Query: 216 FFFNFHYFYYVKKPNFDNFSDTMF 145
           FFF+  +F +V+KP+  N + ++F
Sbjct: 461 FFFDLTFFGFVRKPSLKNGNISIF 484


>Z47358-3|CAA87430.1|  127|Caenorhabditis elegans Hypothetical
           protein ZK1307.2 protein.
          Length = 127

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 163 FFRYDVYNSILTTMLKFRSFKNSVPK-NMHKDNY 65
           F+R   YNS L  +  F S++N   + + HK+ Y
Sbjct: 57  FYRDKFYNSGLPPLYSFASYRNYYHEISFHKNKY 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,175,643
Number of Sequences: 27780
Number of extensions: 64579
Number of successful extensions: 128
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)