Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j06
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450 CY...    26   0.85 
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    26   1.1  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450 pr...    24   3.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.9  

>AY062197-1|AAL58558.1|  150|Anopheles gambiae cytochrome P450
           CYP4C27 protein.
          Length = 150

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 559 LEPNVLVRHPIAFLPSTLGPDREC 488
           L  N   RHP A++P T GP R C
Sbjct: 125 LPENTENRHPYAYIPFTAGP-RNC 147


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 559 LEPNVLVRHPIAFLPSTLGPDREC 488
           L  N   RHP A++P T GP R C
Sbjct: 125 LPENCHGRHPYAYIPFTAGP-RNC 147


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 559 LEPNVLVRHPIAFLPSTLGPDREC 488
           L  N   RHP +++P T GP R C
Sbjct: 125 LPENSTNRHPYSYIPFTAGP-RNC 147


>AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450
           protein.
          Length = 89

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 538 RHPIAFLPSTLGPDREC 488
           RHP  FLP + GP R C
Sbjct: 44  RHPYCFLPFSAGP-RNC 59


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 203 VPWKKEIALTTWRAPSLTSSTMTVILKPTKLLKYIVTRNIPNIS 334
           +P +    ++T R+     S+ T+ LKP+ LL  I   N P+IS
Sbjct: 190 IPPQLSSEISTLRSLHDCISSFTLRLKPSDLLFVIGDFNQPSIS 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,121
Number of Sequences: 2352
Number of extensions: 12478
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)