Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j06
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024791-5|AAF60661.2|  468|Caenorhabditis elegans Hypothetical ...    34   0.071
Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U53154-8|AAC25846.1|  328|Caenorhabditis elegans Hypothetical pr...    28   4.6  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    28   6.1  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AC024791-5|AAF60661.2|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.14 protein.
          Length = 468

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = +1

Query: 262 YDDCDTQANEIAEIYSYTEHPEYQLNVKAFEDIMEEFNHPPSWQRLTKKQQQTVVMMLLE 441
           YDD  T+ ++IA       HPE    VK F++ +E+ +H  S  +      QTVV M  +
Sbjct: 396 YDDKITKMSKIA--MESRGHPEQAEVVKGFQNELEKADHAISSLQSNADMSQTVVRMQQK 453

Query: 442 HLDVAISE 465
            LD   +E
Sbjct: 454 RLDAVENE 461


>Z49068-5|CAA88863.2|  707|Caenorhabditis elegans Hypothetical
           protein K01C8.5 protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +1

Query: 229 NDMESPELDFVYDDCDTQANEIAEIYSYTEHPEY 330
           N   +PE D   DD D Q       Y  + HPEY
Sbjct: 188 NGYRAPEQDHFEDDYDDQPGPSNRHYGVSSHPEY 221


>U53154-8|AAC25846.1|  328|Caenorhabditis elegans Hypothetical
           protein C33G8.5 protein.
          Length = 328

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 297 SNFVGLSITVIVDEVKLGALHVVNAISFFQGTANIR 190
           S FV L IT+I   V L ALH +N+   F     I+
Sbjct: 19  SLFVNLGITIISFPVLLTALHYINSQQLFHRNTRIQ 54


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
           glp-1 protein.
          Length = 1492

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 265 DDCDTQANEIAE-IYSYTEHPEYQLNVKAFEDI 360
           DD D    EI E + SY EH  YQL +  F+ +
Sbjct: 398 DDKDQALREIKECVRSYDEHLNYQLQLAEFDKL 430


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
           protein Y53H1C.2a protein.
          Length = 1512

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 265 DDCDTQANEIAE-IYSYTEHPEYQLNVKAFEDI 360
           DD D    EI E + SY EH  YQL +  F+ +
Sbjct: 418 DDKDQALREIKECVRSYDEHLNYQLQLAEFDKL 450


>Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical protein
            R06C7.8 protein.
          Length = 987

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/64 (21%), Positives = 27/64 (42%)
 Frame = +1

Query: 217  GDCVNDMESPELDFVYDDCDTQANEIAEIYSYTEHPEYQLNVKAFEDIMEEFNHPPSWQR 396
            GD   +++    + + D C    N    I S    P++ + +K+F +I  E      W++
Sbjct: 912  GDYSLNVDIKRRNILRDACYDVINRFLNIPSCDSLPDWNILIKSFSEIWNEKFEASGWRQ 971

Query: 397  LTKK 408
               K
Sbjct: 972  AVSK 975


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,853,694
Number of Sequences: 27780
Number of extensions: 283153
Number of successful extensions: 828
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)