Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j05
         (234 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     25   0.47 
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    21   4.4  
AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.             21   5.8  
AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.             21   5.8  
AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.             21   5.8  
AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.             21   5.8  
AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.             21   5.8  
AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.             21   5.8  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 25  ATQWARTRIIDMPNHVI 75
           A  W R R++D  NH+I
Sbjct: 189 AVPWVRDRVVDFLNHLI 205


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 66  SCYMVILFVSVMSF 107
           +CY+V LFV+ +SF
Sbjct: 86  TCYLVGLFVTWLSF 99


>AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   ELLILLGHTMGAYTDYRYAK 65
           E L++L +    Y D+RY K
Sbjct: 83  ERLLMLANESSVYEDWRYWK 102


>AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   ELLILLGHTMGAYTDYRYAK 65
           E L++L +    Y D+RY K
Sbjct: 83  ERLLMLANESSVYEDWRYWK 102


>AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   ELLILLGHTMGAYTDYRYAK 65
           E L++L +    Y D+RY K
Sbjct: 83  ERLLMLANESSVYEDWRYWK 102


>AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   ELLILLGHTMGAYTDYRYAK 65
           E L++L +    Y D+RY K
Sbjct: 83  ERLLMLANESSVYEDWRYWK 102


>AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   ELLILLGHTMGAYTDYRYAK 65
           E L++L +    Y D+RY K
Sbjct: 83  ERLLMLANESSVYEDWRYWK 102


>AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   ELLILLGHTMGAYTDYRYAK 65
           E L++L +    Y D+RY K
Sbjct: 83  ERLLMLANESSVYEDWRYWK 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,996
Number of Sequences: 2352
Number of extensions: 3315
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)