Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11j05
         (234 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY226553-1|AAO47379.1|  606|Drosophila melanogaster pickpocket 2...    27   4.6  
AY226552-1|AAO47378.1|  632|Drosophila melanogaster pickpocket 2...    27   4.6  
AY084123-1|AAL89861.1|  340|Drosophila melanogaster RE20049p pro...    27   4.6  
AE014298-2487|AAF48671.3|  606|Drosophila melanogaster CG4805-PA...    27   4.6  
AE014298-2486|AAX52502.1|  632|Drosophila melanogaster CG4805-PB...    27   4.6  
AE013599-1773|AAG22272.1|  340|Drosophila melanogaster CG6337-PA...    27   4.6  

>AY226553-1|AAO47379.1|  606|Drosophila melanogaster pickpocket 28
           short form protein.
          Length = 606

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 233 FFFIF*RPHCCNHNVQSAHKR 171
           FF+I  RP+C +  ++  HKR
Sbjct: 507 FFYITVRPYCASRTLRQRHKR 527


>AY226552-1|AAO47378.1|  632|Drosophila melanogaster pickpocket 28
           long form protein.
          Length = 632

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 233 FFFIF*RPHCCNHNVQSAHKR 171
           FF+I  RP+C +  ++  HKR
Sbjct: 533 FFYITVRPYCASRTLRQRHKR 553


>AY084123-1|AAL89861.1|  340|Drosophila melanogaster RE20049p
           protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 233 FFFIF*RPHCCNHNVQSAHKRVKHQTAIN*F 141
           ++FI+ R     HN Q+   R  ++ A+N F
Sbjct: 50  YYFIYNRNQVAQHNAQADRNRTTYREAVNQF 80


>AE014298-2487|AAF48671.3|  606|Drosophila melanogaster CG4805-PA,
           isoform A protein.
          Length = 606

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 233 FFFIF*RPHCCNHNVQSAHKR 171
           FF+I  RP+C +  ++  HKR
Sbjct: 507 FFYITVRPYCASRTLRQRHKR 527


>AE014298-2486|AAX52502.1|  632|Drosophila melanogaster CG4805-PB,
           isoform B protein.
          Length = 632

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 233 FFFIF*RPHCCNHNVQSAHKR 171
           FF+I  RP+C +  ++  HKR
Sbjct: 533 FFYITVRPYCASRTLRQRHKR 553


>AE013599-1773|AAG22272.1|  340|Drosophila melanogaster CG6337-PA
           protein.
          Length = 340

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 233 FFFIF*RPHCCNHNVQSAHKRVKHQTAIN*F 141
           ++FI+ R     HN Q+   R  ++ A+N F
Sbjct: 50  YYFIYNRNQVAQHNAQADRNRTTYREAVNQF 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,973,734
Number of Sequences: 53049
Number of extensions: 130583
Number of successful extensions: 241
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 24,988,368
effective HSP length: 57
effective length of database: 21,964,575
effective search space used: 439291500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)