Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11i23
         (408 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-50|CAD56259.3|  837|Caenorhabditis elegans Hypothetical p...    29   1.3  
Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical ...    28   3.0  
Z83116-5|CAB05568.2|  450|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p...    26   9.1  
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr...    26   9.1  

>Z99281-50|CAD56259.3|  837|Caenorhabditis elegans Hypothetical
           protein Y57G11C.37 protein.
          Length = 837

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 103 QTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVF 258
           +++ +++A R    F E  I F   LLF     L   C LIN LI   ++ F
Sbjct: 613 ESVMSVYA-RPLDDFLEMFIQFGYVLLFSPAFPLAAVCALINNLIEIRVDAF 663


>Z74034-4|CAE17842.2|  319|Caenorhabditis elegans Hypothetical
           protein F43A11.3 protein.
          Length = 319

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 199 NLMVACNLINTLINFEINVFGKVYC*VNLLIFALLTATGLRFNIKC 336
           N   + N+I+ + NF   +FG V C  N++   L +     FN+ C
Sbjct: 10  NYQNSVNVISAVFNFVFGIFG-VICNFNIISIFLTSTERTSFNLIC 54


>AC024817-2|AAU87810.1|  520|Caenorhabditis elegans Hypothetical
           protein Y54G2A.38 protein.
          Length = 520

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 76  LHYSNAHAKQTLATLFA-NRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINT 231
           LH+ NA+ +  + TL A NR  S F+ +    + ++LF  +L  ++   +  T
Sbjct: 98  LHFGNAYFQYFMVTLMAVNRTTSIFFYFVNEKIWSILFPLSLGAVILVEVFFT 150


>Z83116-5|CAB05568.2|  450|Caenorhabditis elegans Hypothetical
           protein M01B2.6 protein.
          Length = 450

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +1

Query: 79  HYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINT 231
           +YS     +      +   H+ F    +TF  TL+F+N    M   N+  T
Sbjct: 98  YYSGTSDSEITINQVSKLTHAIFAFVQLTFDGTLVFRNKNRFMALRNIAKT 148


>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
           protein C18D4.2b protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 297 IANSDGVTIQHKMLTNVLSFLLEKY 371
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
           protein C18D4.2a protein.
          Length = 1817

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 297 IANSDGVTIQHKMLTNVLSFLLEKY 371
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
           protein C18D4.2b protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 297 IANSDGVTIQHKMLTNVLSFLLEKY 371
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
           protein C18D4.2a protein.
          Length = 1817

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 297 IANSDGVTIQHKMLTNVLSFLLEKY 371
           I NS+G  +Q++ LTN+    +EKY
Sbjct: 154 IDNSNGNNLQNQELTNIFGDSIEKY 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,085,635
Number of Sequences: 27780
Number of extensions: 145388
Number of successful extensions: 330
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)