Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11i15
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 44 2e-05
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 43 4e-05
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 43 4e-05
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 42 9e-05
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 42 1e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 41 1e-04
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 41 2e-04
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 40 5e-04
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 39 6e-04
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 36 0.004
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 36 0.006
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.007
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 35 0.010
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 35 0.010
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 35 0.013
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 35 0.013
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 34 0.017
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 34 0.017
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 34 0.017
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 34 0.023
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 34 0.023
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 34 0.023
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 33 0.040
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 33 0.040
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 33 0.040
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 33 0.052
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 33 0.052
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 32 0.069
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 32 0.091
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 32 0.091
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 32 0.091
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 31 0.12
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.12
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.21
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 30 0.28
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 30 0.28
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 29 0.49
SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.64
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 28 1.1
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 1.5
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 28 1.5
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 2.0
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 27 2.6
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 2.6
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 2.6
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 3.4
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 27 3.4
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 27 3.4
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 26 4.5
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 26 4.5
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 4.5
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 26 6.0
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 6.0
SPAC2F3.18c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.0
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 44.0 bits (99), Expect = 2e-05
Identities = 31/94 (32%), Positives = 52/94 (55%)
Frame = +2
Query: 302 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSIL 481
P+ TK +V +H +G ++SV + + HN L +CS DKT +W L+N N + + L
Sbjct: 267 PDASTKPARSVHAH-SGPIHSVAF-NPHNDFI--LATCSTDKTIALWDLRNLNQRLHT-L 321
Query: 482 KGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
+GH + VT I + H + + + + S D VW+
Sbjct: 322 EGHEDIVTKISFSPHEEPI-LASTSADRRTLVWD 354
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
GH++ V+ H+ + +LSCS D+T IW Q+ N +IL GH+ V + +H
Sbjct: 93 GHMDYVRVCTFHH-EYPWILSCSDDQTIRIWNWQSR--NCIAILTGHSHYV--MCAAFHP 147
Query: 530 DRLTIYTASTDSTIKVWE 583
I +AS D T++VW+
Sbjct: 148 SEDLIVSASLDQTVRVWD 165
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 43.2 bits (97), Expect = 4e-05
Identities = 41/132 (31%), Positives = 62/132 (46%)
Frame = +2
Query: 305 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILK 484
N +T + +++L HT V + + +T L+S S D T +W G +T L+
Sbjct: 339 NYRTSECISILHGHTDSVLCLTF------DSTLLVSGSADCTVKLWHFSGGK-RIT--LR 389
Query: 485 GHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQIL 664
GHT V ++ DR + + S DSTIK+W +E T T + S H G Q L
Sbjct: 390 GHTGPVNSV--RIIRDRGLVLSGSDDSTIKIWS-LE-TNTCLHTFSAHIG-----PVQSL 440
Query: 665 PCANKPLLLCAL 700
A+ L C+L
Sbjct: 441 ALADSRLFSCSL 452
Score = 39.9 bits (89), Expect = 3e-04
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +2
Query: 398 TELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKV 577
+ L SCS+D T W ++ T L GH EGV I D L + + + D +KV
Sbjct: 445 SRLFSCSLDGTIKQWDIEKKKCVHT--LFGHIEGVWEIAA----DHLRLISGAHDGVVKV 498
Query: 578 WERIEGTVTLK 610
WE E TLK
Sbjct: 499 WEACECVHTLK 509
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 41.9 bits (94), Expect = 9e-05
Identities = 30/95 (31%), Positives = 51/95 (53%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
GH + V + + + +++S S DKT IW + GN T GH++ V+ + + +
Sbjct: 103 GHTSDVLSV-SISPDNRQVVSGSRDKTIKIWNII-GNCKYTITDGGHSDWVSCVRFSPNP 160
Query: 530 DRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSG 634
D LT +A D +KVW+ +E T +L+ S H+G
Sbjct: 161 DNLTFVSAGWDKAVKVWD-LE-TFSLRTSHYGHTG 193
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2
Query: 407 LSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWER 586
LS S DKT +W L+ G T GHT V ++ + D + + S D TIK+W
Sbjct: 79 LSASWDKTIRLWDLEKG--ECTHQFVGHTSDVLSV--SISPDNRQVVSGSRDKTIKIWNI 134
Query: 587 I 589
I
Sbjct: 135 I 135
Score = 32.3 bits (70), Expect = 0.069
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTL--QNGNWNVTS-ILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIK 574
LLS S DK+ ++W L + N+ V L GH+ V++ ++ D +AS D TI+
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF--DSHYALSASWDKTIR 88
Query: 575 VWERIEGTVT 604
+W+ +G T
Sbjct: 89 LWDLEKGECT 98
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 212 VACNRKPEVVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSV-KWIHNHN 388
V CNR P W+ + YGA + V DP K+ +++ H+G +N V + N
Sbjct: 9 VGCNRIPTAATWSSNLGLIYGAERLIAVADP---FKEINYLMAGHSGRINCVCELATNSE 65
Query: 389 GQTTELLSCSVDKTAVIWTLQ 451
++ +LS + DKT +W L+
Sbjct: 66 YRSPFILSGASDKTLRLWQLE 86
Score = 31.5 bits (68), Expect = 0.12
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 431 AVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTLK 610
AVI + +WN +LKGH+ VT I + D I +A D + + E+ E +
Sbjct: 558 AVIRLYETQSWNQQQVLKGHSLTVTTI--KFSPDDRYILSAGRDRLVCLHEQAENLLDYN 615
Query: 611 Q--SISLHS 631
SI HS
Sbjct: 616 NFASIKAHS 624
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = -2
Query: 604 GYRTFYPFPNFNGRISGRSVNSKSVS-MVISIYISNSFCMS--LENTGDVPVTIL*CPDD 434
GY + + NG I+ S S++ VI +Y + S+ L+ TI PDD
Sbjct: 531 GYEVYACAISNNGNIAATSCKSQTPEHAVIRLYETQSWNQQQVLKGHSLTVTTIKFSPDD 590
Query: 433 SSLIN*AREQLCCL 392
+++ R++L CL
Sbjct: 591 RYILSAGRDRLVCL 604
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 437 IWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIE 592
+W G W + GHT+ V + + G +A TD T +++ R +
Sbjct: 352 LWKQDAGQWLQLPSISGHTKSVKGVAWDPEGK--FYLSAGTDQTTRLFARFK 401
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 41.1 bits (92), Expect = 1e-04
Identities = 28/90 (31%), Positives = 45/90 (50%)
Frame = +2
Query: 326 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVT 505
V L HT +V+S+ + N T L+S S D+T IW LQ+G +L H+E +
Sbjct: 131 VRCLKGHTNYVSSIDF----NPLGTLLVSGSWDETVRIWNLQDG--TCLRMLPAHSEPII 184
Query: 506 NIYGNYHGDRLTIYTASTDSTIKVWERIEG 595
++ + D TAS D ++W+ + G
Sbjct: 185 SV--SISADGTLCATASYDGMARIWDVLSG 212
Score = 40.7 bits (91), Expect = 2e-04
Identities = 31/90 (34%), Positives = 45/90 (50%)
Frame = +2
Query: 329 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTN 508
T+ H+ G ++ VKW + L S S DKT IW + +V LKGHT V++
Sbjct: 91 TLFGHYRG-ISQVKWATG----SKYLASASDDKTIRIWDFEK-RCSVRC-LKGHTNYVSS 143
Query: 509 IYGNYHGDRLTIYTASTDSTIKVWERIEGT 598
I N G L + S D T+++W +GT
Sbjct: 144 IDFNPLGTLLV--SGSWDETVRIWNLQDGT 171
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 479 LKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERI 589
L GH + VT + + ++ I T+S+D TIK+W +
Sbjct: 50 LFGHEKSVTCV--SVSPNKRWIATSSSDGTIKIWSAL 84
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
L +CS D T IW+ ++ ++ + L+GH V + + D + TAS+D ++WE
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDC--AFSADSTYLVTASSDHVARLWE 287
Query: 584 RIEGTVTLKQSISLH-SGLCLTLH 652
G T++Q H + +C+ L+
Sbjct: 288 LSSGE-TIRQYSGHHKAAVCVALN 310
Score = 31.9 bits (69), Expect = 0.091
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 482 KGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
+GHT VT I +H D + T+S D T+KVW+
Sbjct: 80 EGHTNNVTAIA--FHCDGKWLATSSEDGTVKVWD 111
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 39.5 bits (88), Expect = 5e-04
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +2
Query: 302 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSIL 481
PN++ + +L HT V + W H N L +CS+D + W L++ + V S
Sbjct: 309 PNDRAIE--FMLHGHTRAVTDMNW-HRQNPDV--LATCSIDSSVHCWDLRSPRFPVNSFY 363
Query: 482 KGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTL 607
H G T + NY I +S +++W+ G+ L
Sbjct: 364 DWH-NGATQVKWNYKNPH--ILASSHGRLVRIWDDRYGSAPL 402
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 39.1 bits (87), Expect = 6e-04
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYH- 526
GH V + + T S +D T +W+ + N T L+ H GV Y NY+
Sbjct: 139 GHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFT--LQAHDRGVN--YVNYYP 194
Query: 527 -GDRLTIYTASTDSTIKVWE 583
GD+ + TA D+ IKVW+
Sbjct: 195 AGDKPYLITAGDDNLIKVWD 214
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +2
Query: 353 HVNSVKWIHNHN-GQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
H V +++ + G L++ D +W Q IL+GHT V+ + +H
Sbjct: 183 HDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKA--CVRILEGHTNNVS--FAFFHS 238
Query: 530 DRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSGLCL 643
I + S D T+K+W + ++ + SL C+
Sbjct: 239 KFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCI 276
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 36.3 bits (80), Expect = 0.004
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Frame = +2
Query: 272 GACNAVVVCDPNEKTK--DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW- 442
GA A+ V NE+ K D+V + HT V W H+ L S D +IW
Sbjct: 54 GAGGALAVIPLNERGKLPDQVNLFRGHTAAVLDTDWNPFHD---QVLASGGDDSKIMIWK 110
Query: 443 -----TLQNGNWNVTSI--LKGHTEGVTNIYGNYHGDRLTIYTAST-DSTIKVWERIEGT 598
T+ +V I LKGH+ V + YH + +S+ D+TIK+W+ +G
Sbjct: 111 VPEDYTVMEPYEDVHPIAELKGHSRKVGLV--QYHPTAANVLASSSADNTIKLWDCEKGV 168
Query: 599 --VTLKQSISLHS 631
V+LK + S
Sbjct: 169 AHVSLKMDVMCQS 181
Score = 31.5 bits (68), Expect = 0.12
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
GH V + H L S S D T +W + G +V+ + + + +++
Sbjct: 132 GHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSM-----SFNA 186
Query: 530 DRLTIYTASTDSTIKVWE 583
D + T S D ++VW+
Sbjct: 187 DGTRLVTTSRDKKVRVWD 204
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 35.9 bits (79), Expect = 0.006
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +2
Query: 332 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNI 511
V+ H+ +N+V I+ N L + S DKT +W L+N + L+GH + V +
Sbjct: 276 VIQAHSKAINAVA-INPFNDYL--LATASADKTVALWDLRN-PYQRLHTLEGHEDEVYGL 331
Query: 512 YGNYHGDRLTIYTASTDSTIKVWE 583
+ H D + ++STD + +W+
Sbjct: 332 EWSPH-DEPILASSSTDRRVCIWD 354
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 35.5 bits (78), Expect = 0.007
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +2
Query: 260 IICYGAC-NAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTE---LLSCSVDK 427
II G+ N + DP +K L HT + ++ W H + L S S D
Sbjct: 191 IIATGSMDNTIRFWDP-KKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 428 TAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEG 595
T IW ++ T L GHT +T + G + IY++S D TI++W+ +G
Sbjct: 250 TVRIWNVKLRTLLFT--LSGHTAPITCVRW---GGQNWIYSSSYDKTIRIWDAKDG 300
Score = 33.9 bits (74), Expect = 0.023
Identities = 25/99 (25%), Positives = 49/99 (49%)
Frame = +2
Query: 287 VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWN 466
+++ DP + TK +T + H VN + + +G+ + + S D + +W + G +
Sbjct: 370 LILWDPQKSTKP-ITKMHGHQKVVNHASF--SPDGRC--IATASFDSSVRLWDGKTGKFL 424
Query: 467 VTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
T L+GH V + D + ++S D+T+KVW+
Sbjct: 425 AT--LRGHVAAVYQCA--WSTDSRLLVSSSQDTTLKVWD 459
Score = 32.7 bits (71), Expect = 0.052
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
L+S S D ++W Q +T + GH + V + ++ D I TAS DS++++W+
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITK-MHGHQKVVN--HASFSPDGRCIATASFDSSVRLWD 417
Score = 31.1 bits (67), Expect = 0.16
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
GH ++ ++ L++ S D TA +W T +KGHT V+ + +
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIAT--MKGHTNWVSCVA--WAP 187
Query: 530 DRLTIYTASTDSTIKVWERIEGT 598
D I T S D+TI+ W+ +G+
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGS 210
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 35.1 bits (77), Expect = 0.010
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 332 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNI 511
V+ H+ GH++ V + H L++ D A +W ++ NV +L GH V ++
Sbjct: 239 VIRHYHGHLSGVYALKLHPTLDV-LVTAGRDAVARVWDMRTRQ-NV-HVLSGHKSTVASL 295
Query: 512 YGNYHGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLH 652
+ + T S DSTI++W+ G + + L+LH
Sbjct: 296 AVQEFDPQ--VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLH 340
Score = 29.5 bits (63), Expect = 0.49
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 461 WNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGT--VTLKQSISLHSG 634
W + ++ GH V + + T + D TIK+W+ G +TL I+ G
Sbjct: 153 WTLMRVISGHLGWVRCV--DVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRG 210
Query: 635 LCLT-LHAQILPCANKPLLLC 694
L ++ H + C ++ C
Sbjct: 211 LAVSPRHPYLFSCGEDKMVKC 231
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 35.1 bits (77), Expect = 0.010
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +2
Query: 434 VIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEG--TVTL 607
++W Q+ ++ + + H + ++ + Y D I T + D IKVW+ G VT
Sbjct: 322 LVWEWQSESYVLKQ--QSHYDALSTL--QYSSDGQRIITGADDGKIKVWDMNSGFCIVTF 377
Query: 608 KQSISLHSGLCLTLHAQIL 664
Q S SGLC + +L
Sbjct: 378 TQHTSAVSGLCFSKRGNVL 396
Score = 32.3 bits (70), Expect = 0.069
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 344 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNY 523
+TGH + + I + + + +S S D TA + ++ L GH V + G +
Sbjct: 142 YTGHFDDIVSI-SWSADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVS--GFF 198
Query: 524 HGDRLTIYTASTDSTIKVWE 583
D+ TIYT S D + VW+
Sbjct: 199 SKDQQTIYTVSKDGALFVWK 218
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.7 bits (76), Expect = 0.013
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Frame = +2
Query: 314 TKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHT 493
+KD + + + GH N+ W + + S D+TA +W +++ + GH
Sbjct: 431 SKDTKSTIVKYAGH-NAPIWDVQFSPFGYYFATASHDQTARLWDVEHAA--PLRVFVGHQ 487
Query: 494 EGVTNIYGNYHGDRLTIYTASTDSTIKVWE-RIEGTV-TLKQSISLHSGLCLTLHAQILP 667
V + ++H + + T S+D T ++W+ R GTV S S LC++ L
Sbjct: 488 NDVDCV--SFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLA 545
Query: 668 CANK 679
A++
Sbjct: 546 SADE 549
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 34.7 bits (76), Expect = 0.013
Identities = 29/116 (25%), Positives = 50/116 (43%)
Frame = +2
Query: 236 VVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC 415
VV +N G A N VV N K+ + + H + + +++ +T+ SC
Sbjct: 19 VVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYD----STKFASC 74
Query: 416 SVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
DK +W + G V L GH + I Y+ D + + S DS +++W+
Sbjct: 75 GGDKFIQVWDVNTG--KVDRRLGGHLAQINTI--RYNEDSSILASGSFDSKVRLWD 126
Score = 33.9 bits (74), Expect = 0.023
Identities = 27/111 (24%), Positives = 52/111 (46%)
Frame = +2
Query: 272 GACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 451
G + V D N DR L H +N++++ N ++ L S S D +W +
Sbjct: 75 GGDKFIQVWDVNTGKVDRR--LGGHLAQINTIRY----NEDSSILASGSFDSKVRLWDCR 128
Query: 452 NGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVT 604
+ +++ +L + V++I H I T STD T++ ++ +GT++
Sbjct: 129 SNSFSPIQVLADAKDSVSSIDIAEH----LIVTGSTDGTLRTYDIRKGTLS 175
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 34.3 bits (75), Expect = 0.017
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 407 LSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
+S S+DK+ +W L G +L+GH VT + N +RL + S DSTI++W+
Sbjct: 563 ISGSMDKSIRVWDLSTGTCKY--VLEGHDAFVTLL--NVFQNRLI--SGSADSTIRIWD 615
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGH 490
GH V + H L+S S+DKT +W ++ T I +GH
Sbjct: 389 GHKEGVWAVKIHENT---LVSGSIDKTVRVWNIEKA--KCTHIFRGH 430
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 34.3 bits (75), Expect = 0.017
Identities = 21/91 (23%), Positives = 37/91 (40%)
Frame = +2
Query: 311 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGH 490
K + + H+ VN + H+ G ++SCS D T +W N + S + H
Sbjct: 67 KASQPLAKIQAHSAWVNDIALTHDSEG----VISCSSDSTVKLWKPHVLNASCLSTIGEH 122
Query: 491 TEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
T+ V + + + + D I VW+
Sbjct: 123 TDYVKRVSIPKYSKSPLVASGGLDKRIIVWD 153
Score = 32.7 bits (71), Expect = 0.052
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 479 LKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVW 580
L GHT+ V +I D TI TAS+D+TIK+W
Sbjct: 212 LVGHTDNVRDIL--ISDDGRTILTASSDATIKLW 243
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 34.3 bits (75), Expect = 0.017
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +2
Query: 416 SVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEG 595
S+D+ +W++ + L+GH E V +I + D + + S D TIKVWE ++
Sbjct: 462 SLDQIIRVWSVSG---TLVERLEGHKESVYSIA--FSPDSSILLSGSLDKTIKVWE-LQA 515
Query: 596 TVTLKQSISLHSGLC 640
T ++ S G+C
Sbjct: 516 TRSVGLSAIKPEGIC 530
Score = 28.3 bits (60), Expect = 1.1
Identities = 25/79 (31%), Positives = 35/79 (44%)
Frame = +2
Query: 329 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTN 508
T++ GH SV I + ++ LLS S+DKT +W LQ S +K EG+
Sbjct: 475 TLVERLEGHKESVYSIA-FSPDSSILLSGSLDKTIKVWELQATRSVGLSAIK--PEGICK 531
Query: 509 IYGNYHGDRLTIYTASTDS 565
H D + S DS
Sbjct: 532 ATYTGHTDFVLSVAVSPDS 550
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 33.9 bits (74), Expect = 0.023
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 305 NEKTKDRVTVLS-HHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSIL 481
N T + V V+ HT + V W + L S D I + +W T+ L
Sbjct: 318 NSNTYNLVHVIDGFHTRSIRRVAW---RPIERPVLAVASFDSVVSINEKIDDDWECTAAL 374
Query: 482 KGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIE 592
+GH V I + +G+ L T S D ++ +WE E
Sbjct: 375 EGHENEVKCIAWSCNGNYLA--TCSRDKSVWIWEATE 409
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 33.9 bits (74), Expect = 0.023
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +2
Query: 323 RVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGV 502
R +L H + +K+ NH+G L SC+ DK +W NG T +GHT +
Sbjct: 2 RPIILQGHERPLTQIKY--NHDGDL--LFSCAKDKVINVWFSHNGERLGT--YEGHTGAI 55
Query: 503 TNIYGNYHGDRLTIYTASTDSTIKVWE 583
+ + + + + D+T+++W+
Sbjct: 56 WTC--DINKSSTLMVSGAADNTMRLWD 80
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 33.9 bits (74), Expect = 0.023
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 416 SVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEG 595
S+DK IWT + + L GH E V ++ + G L + S D+TIK+WE ++
Sbjct: 436 SLDKVIRIWT---SSGTLVEQLHGHEESVYSVAFSPDGKYLV--SGSLDNTIKLWE-LQC 489
Query: 596 TVTLKQSISLHSGLC 640
+ S+ G+C
Sbjct: 490 VSNVAPSMYKEGGIC 504
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 33.1 bits (72), Expect = 0.040
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 437 IWTLQNGNWNV---TSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
+W L+ G + V T I GH E VT+I + I T STD + +WE
Sbjct: 270 LWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWE 321
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.1 bits (72), Expect = 0.040
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIY 514
L H+G V + W H G T L S S D ++W G W+ H V +
Sbjct: 49 LRGHSGPVWQLGWAHPKFG--TILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVS 106
Query: 515 GNYHGDRLTIYTASTDSTIKVWE 583
H + AS+D + V E
Sbjct: 107 WAPHEYGALLACASSDGKVSVLE 129
Score = 32.3 bits (70), Expect = 0.069
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
L +CS D+T +++++N + L+GH+ V + + + +AS D + VW
Sbjct: 24 LATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWR 83
Query: 584 RIEG 595
G
Sbjct: 84 ETGG 87
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 467 VTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSG 634
+T++ H + + + +Y+G RL T S+D TIKV+ TL +++ HSG
Sbjct: 1 MTTVDTQHDDMIHDAILDYYGKRLA--TCSSDQTIKVFSIENNQQTLLETLRGHSG 54
Score = 29.1 bits (62), Expect = 0.64
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGNWNVTSI 478
L+ H V W + T L S S DK IWT + +G W T +
Sbjct: 201 LAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPL 249
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 33.1 bits (72), Expect = 0.040
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGN--WNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKV 577
++S S D TA +W L + +L+GH V ++ Y I TAS+D T++
Sbjct: 316 IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV--QYSSKTGLIVTASSDRTLRT 373
Query: 578 WERIEG 595
W+ G
Sbjct: 374 WDITTG 379
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 32.7 bits (71), Expect = 0.052
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
L++CS DK IW L G+ + + + H + + + + D +T S D ++ W+
Sbjct: 591 LVTCSADKNVKIWGLDFGDCHKS--IFAHQDSIMEV--TFQPDTYNFFTCSKDREVRYWD 646
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 32.7 bits (71), Expect = 0.052
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +2
Query: 305 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILK 484
N T + V L HT +V + + LLS S D + ++W + + + L
Sbjct: 118 NVSTGECVETLIGHTDYVKCLLLLEEEG----LLLSGSTDASLIVWDVSSQPSRLLYKLT 173
Query: 485 GHTEGVTNIYGNYHGDRLTIYTASTDSTIKVW 580
GH+ G+ I + D +T ++S+I+ W
Sbjct: 174 GHSRGIECITRQPNTD--IFWTCGSESSIRCW 203
Score = 30.7 bits (66), Expect = 0.21
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
GH ++V + + L + S DKT W+L G T + H + T++ G
Sbjct: 220 GHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQGIHEETRM--EHPDVCTDVLTLADG 277
Query: 530 DRLTIYTASTDSTIKVWERIEGTV 601
+ I TA D I+VW+ G V
Sbjct: 278 N---IATACRDEEIRVWDTTTGNV 298
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 32.3 bits (70), Expect = 0.069
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +2
Query: 317 KDRVTVLSHHTG--HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGH 490
+D VT+ H H ++V + G T E+ SCS D++ +W+L ++ T L GH
Sbjct: 235 RDSVTLEPQHCWKHHRDAVMGLAMRRG-TNEMFSCSADRSIKVWSLDQMSYIET--LFGH 291
Query: 491 TEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIE 592
+ + + + + D T ++W+ +E
Sbjct: 292 QDVIFGV--DALARERCVSVGGRDRTSRLWKIVE 323
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 31.9 bits (69), Expect = 0.091
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSI---LKGHTEGVT 505
LS HTG+V +V W + L S S D T +W ++ + + + K T
Sbjct: 185 LSGHTGNVLAVDWCPKNE---FVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQT 241
Query: 506 NI--YGNYHG-----DRLTIYTASTDSTIKVWERIEGTVTLKQ 613
NI YG +G D + + TD I+VW G TL++
Sbjct: 242 NISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLRE 284
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 31.9 bits (69), Expect = 0.091
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 350 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHG 529
GH+++V +I + LLSCS DK+ ++W G L+ + G + +
Sbjct: 253 GHIDTVAYIR-WSPDDRYLLSCSCDKSVILWDAFTG-----EKLRDYKHGFSVSCCCWLP 306
Query: 530 DRLTIYTASTDSTIKVWERIEGTVTLK 610
D L+ T S D I W + G + K
Sbjct: 307 DGLSFITGSPDCHITHWS-LNGEILYK 332
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 31.9 bits (69), Expect = 0.091
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 335 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ---NGNWNVTSILKGHTEGVT 505
L H G VN+VKW+ G ++L +C D +W L N + T + G T G+T
Sbjct: 311 LRGHKGDVNAVKWM---PGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMT 367
Query: 506 NIYGNY 523
Y
Sbjct: 368 GSTSEY 373
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 464 NVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHS 631
N+ + H+E +T++ ++ T+ TASTD T+KVW+ + G V L S+ HS
Sbjct: 323 NLVKQFQAHSEYITSL--DFSHPFGTLATASTDKTVKVWD-MAGVVYL-GSLKGHS 374
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVW 580
LLSCS D +A +W++ V KGHT V ++ G TAS D T ++W
Sbjct: 394 LLSCSEDASARLWSVDTKTALVA--YKGHTGPVWDVAFGPFGHYFA--TASHDQTAQLW 448
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 30.7 bits (66), Expect = 0.21
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 422 DKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTV 601
D IW L++G +L H + + + +G +L T+S D T+K+W+ + V
Sbjct: 328 DAIGRIWDLRSGK--SIMVLDEHIRQIVAMAWSPNGYQLA--TSSADDTVKIWDLRK--V 381
Query: 602 TLKQSISLHSGL 637
+L +I HS L
Sbjct: 382 SLAHTIPAHSSL 393
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +2
Query: 437 IWTLQNGNWNVTSILKGHTEGVTNI-------YGNYHGDRLTIYTASTDSTIKVWERIEG 595
+W + N + + +GHT+ V+ + + ++LT+ T + D+T+ +W+ +
Sbjct: 198 VWN--SDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQS 255
Query: 596 TVTLK 610
T L+
Sbjct: 256 TPLLR 260
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 30.3 bits (65), Expect = 0.28
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +2
Query: 404 LLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIY---GNYHGDRLTIYTASTDSTIK 574
L+S VD+ + T N + S GH + ++ G RL YTAS D+TI+
Sbjct: 146 LISTLVDQNSTFET-SNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRL--YTASEDNTIR 202
Query: 575 VWERIEGTVTLKQSISLHS-GLCLTL 649
+W+ T L +I+L S C+T+
Sbjct: 203 IWD--VSTGNLLTTIALPSTPSCMTV 226
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 30.3 bits (65), Expect = 0.28
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 371 WIHNHNGQTT-ELLSCSVDKTA----VIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDR 535
W + +TT E S S+ K +T Q G + + +GHT V +I + D
Sbjct: 224 WDFERSPETTLESFSSSISKKRRRKNAEFTPQAGARSPLILCEGHTGPVMDIV--FSDDP 281
Query: 536 LTIYTASTDSTIKVWERIEG 595
Y+ D TIK W+ I G
Sbjct: 282 SVAYSVGQDHTIKTWDLITG 301
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 29.5 bits (63), Expect = 0.49
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Frame = +2
Query: 305 NEKTKDRVTVLSH-HTGHVNSVKWIH----NHNGQTTELLSCSVDKTAVIWTL----QNG 457
N +D V H TGH SV + + NG T L S S D+T + L
Sbjct: 392 NLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKS 451
Query: 458 NWNVTSI--LKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTV 601
+++ ++ +K H V I + G R+ I +AS D TIK+W+ G V
Sbjct: 452 DFSNRAVWTIKAHDRDVNAIQVSKDG-RI-IASASQDKTIKLWDSSTGEV 499
>SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 114
Score = 29.1 bits (62), Expect = 0.64
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 368 KWIHNHNGQTTELLSCSVDKTAVIWTLQNG--NWNVTSILKGHTEGVTNIYGNY 523
+W+ + + + ++C D IW G +W + + +G T +T I Y
Sbjct: 14 QWVETSSLELVDSVNCVADLCHAIWMFNGGCADWRLQILKEGFTVPMTGIISQY 67
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.3 bits (60), Expect = 1.1
Identities = 31/124 (25%), Positives = 45/124 (36%)
Frame = +2
Query: 311 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGH 490
KT + L H G V W + G T L++ S D+T +W L+ G + GH
Sbjct: 434 KTGVLIRSLEEHEGDV----WTFEYVGDT--LVTGSTDRTVRVWDLRTG--ECKQVFYGH 485
Query: 491 TEGVTNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSGLCLTLHAQILPC 670
T + I G++ T TD K + S T+ LPC
Sbjct: 486 TSTIRCI-KIVQGNQ---STTDTDDVEKENRPASNDANSMPPYIISSSRDCTIRLWSLPC 541
Query: 671 ANKP 682
+ P
Sbjct: 542 LDDP 545
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.9 bits (59), Expect = 1.5
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = +2
Query: 344 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNY 523
HT + + W N+ LLS S+DKTA +W + H++ VT+I +
Sbjct: 308 HTADILDLSWSRNNF-----LLSSSMDKTARLWHPVRKD---CLCCFEHSDFVTSIAFHP 359
Query: 524 HGDRLTIYTASTDSTIKVWERIEGTVT 604
DR + + S D +++W E V+
Sbjct: 360 KDDRFFL-SGSLDCKLRLWSIKEKAVS 385
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 503 TNIYGNYHGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSGL 637
T + Y + T++ D T+K E I GT+T K + H L
Sbjct: 269 TGPFSRYTHWKQTVFYTHKDLTVKAGEYIRGTITCKPAEGNHREL 313
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 519 FPYILVTPSVCPLRILVTFQLPFCNVQMTAVLSTEQE 409
F LV+P +C L ++ FQ F V++ + +QE
Sbjct: 1062 FSLFLVSPLICALATMLAFQKFFYQVRLNKGIEKKQE 1098
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 392 QTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTI 571
+T L C+ K A++ +++ N S H++ V + G++H + + T D+T
Sbjct: 270 ETPLALVCTDSKDAMLIDIRS---NSVSAKLPHSDSV--LTGSWHPNGNILATGGQDTTA 324
Query: 572 KVWE 583
KVW+
Sbjct: 325 KVWD 328
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.1 bits (57), Expect = 2.6
Identities = 34/157 (21%), Positives = 70/157 (44%)
Frame = +2
Query: 164 VFCGTMKVSVEQVYTSVACNRKPEVVDWNYEGIICYGACNAVVVCDPNEKTKDRVTVLSH 343
+FC T+++S ++Y + A + ++ W + Y + V D T L
Sbjct: 147 LFCATVQISGNEIYIASA-SAFQQIYVWKFN----YNNPPSCVSID---------TYLVG 192
Query: 344 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNY 523
H G +K+ + +G+ L S S D+T +W++++ + + + GH+ ++
Sbjct: 193 HEGACFDLKF--SSDGRY--LCSVSEDRTLRLWSIESSPFLIATGF-GHS---ARVWRCV 244
Query: 524 HGDRLTIYTASTDSTIKVWERIEGTVTLKQSISLHSG 634
I T S D T+++W + T+T + + H G
Sbjct: 245 FLPNKEIATVSEDLTLRLWTWNDKTLTNTYTYTGHRG 281
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 353 HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 451
H +SVK ++ N L+SCS D + + W ++
Sbjct: 227 HSHSVKQVNFCNDSPYNLVSCSRDGSIIFWDMR 259
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 26.6 bits (56), Expect = 3.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +2
Query: 398 TELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIKV 577
T LS S DKT +W L G V L GH E RL + D TI++
Sbjct: 137 TTFLSGSDDKTVKVWDLSTG--AVQYDLSGH-EDYVRTASWMSATRLV--SGGYDGTIRL 191
Query: 578 WE 583
W+
Sbjct: 192 WD 193
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 248 NYEGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDK 427
N E GA V V D KT D+V + H G + S+ W + +++ ++ S
Sbjct: 200 NDERFASAGADGKVYVFDG--KTGDQVYEIDAHKGSIFSISW----SPDSSQFVTSSAGY 253
Query: 428 TAVIWTLQNGN 460
+ IW G+
Sbjct: 254 SCKIWDANTGS 264
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 26.6 bits (56), Expect = 3.4
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +2
Query: 221 NRKPEVVDWNYEGIICYGACNA----VVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHN 388
N K V+ + G Y A + + + D ++T+ + L+ V ++WI
Sbjct: 303 NNKGPVLSLKWSGTDTYLAAGSADGTITLFDQLKQTQYSIDTLA---SSVLDIEWI---- 355
Query: 389 GQTTELLSCSVDKTAVIWTLQNGNWNVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDST 568
E ++ V+ + ++ + +G V+++ H + + N L TAS+D+T
Sbjct: 356 -SFDEFVTSDVEGSLRVYKV-DGKAPVSTVSHAHDNSIVALRYNLRISLLL--TASSDTT 411
Query: 569 IKVWER 586
+K+W R
Sbjct: 412 VKLWSR 417
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 464 NVTSILKGHTEGVTNIYGNYHGDRLTIYTASTDSTIK 574
NV I+ G T G IYG Y GD T++ A ++ IK
Sbjct: 387 NVPCII-GATIGC--IYGGYFGDYFTLWAAKRNNGIK 420
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 256 FVIPVYHFRFAVTGDRCIHLFYRHLHSTTKYFLNKFNFQKKSCTRISE 113
F++P RF++T + C + Y T+YFL K + S ++ SE
Sbjct: 100 FILPKTLIRFSLTVEECTNPEYCMDEHDTEYFL-KLKQAQPSLSKFSE 146
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 485 GHTEGVTNIYGNYHGDRLTIYTASTDSTIKVWE 583
GH++ VT + +G R YT S D+TI W+
Sbjct: 87 GHSKIVTTTTFDKNGSRF--YTGSLDNTIHCWD 117
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 496 FCMSLENTGDVPVTIL*CPDDSSLIN*AREQLCCLAIVIVYPFYRVYVSCMVTQY 332
F ++ E+TG + C + S N E L L ++ +PFYR + +V QY
Sbjct: 252 FLIANESTGHLMKNH--CRNSSPHDNPILEYLFALVSLLAWPFYRRKLDSLVYQY 304
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -2
Query: 250 IPVYHFRFAVTGDRCIHLFYRHLHSTTKYFL 158
I + FR A T D+C+ LFY L S T FL
Sbjct: 12 IDINFFRNA-TLDQCLLLFYLSLFSLTNLFL 41
>SPAC2F3.18c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 110
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 67 CYYYIHNISVLVKSNILIYG 126
C+ Y N+SV S+ILIYG
Sbjct: 89 CFKYSMNLSVAEGSSILIYG 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,875,787
Number of Sequences: 5004
Number of extensions: 61001
Number of successful extensions: 275
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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