Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11h19
         (218 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    21   3.9  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            21   5.2  
AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione S-tran...    21   5.2  

>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 15  YCVGRYWQGSGLLPCYPLYNEN*AR*KEKMRIET 116
           Y V +Y QG G    YP      AR  E +  E+
Sbjct: 74  YLVRKYGQGEGKDALYPTEIVEQARVNEALHFES 107


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 75  HYRAGSREADRIPASTGPRSSYGP 4
           H+ AG  + DR+  S    S  GP
Sbjct: 153 HHFAGLDQLDRLAISNAKLSDIGP 176


>AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 15  YCVGRYWQGSGLLPCYPLYNEN*AR*KEKMRIET 116
           Y V +Y QG G    YP      AR  E +  E+
Sbjct: 74  YLVRKYGQGEGKDALYPTDIVEQARVNEALHFES 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,182
Number of Sequences: 2352
Number of extensions: 2341
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 50
effective length of database: 446,379
effective search space used:  9820338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)