Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11h10
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 68 1e-12
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 43 5e-05
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 41 2e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 40 3e-04
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 39 8e-04
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 39 8e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 37 0.003
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 36 0.004
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 36 0.008
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 34 0.017
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 34 0.017
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 34 0.023
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 33 0.040
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 33 0.040
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 33 0.053
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 32 0.070
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 32 0.092
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 32 0.092
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 31 0.12
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 31 0.16
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.21
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.21
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 31 0.21
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 30 0.28
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 30 0.28
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 30 0.37
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 0.65
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 29 0.65
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 28 1.1
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 28 1.5
SPBC14F5.05c |sam1||S-adenosylmethionine synthetase |Schizosacch... 27 2.6
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 2.6
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 27 3.5
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 27 3.5
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 4.6
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 4.6
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 26 4.6
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 26 6.1
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 8.0
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 25 8.0
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 68.1 bits (159), Expect = 1e-12
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Frame = +2
Query: 107 VHRIRYYNPQPTPVNCIAYNKLNKQ---------LSLARKDSSIEIWDMTHFPFLLKFIP 259
+HR R+ + P+ + +A++ + Q L++ R +IEIW+ + L +
Sbjct: 3 IHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIWNPRNDWCLKTVLY 62
Query: 260 AVKDGSVEALGWVKD----RLLTTGLGGALVEWNLEE-MCIRNTILLTGYAAWCLDVSPD 424
D S+E + W RL + G + EWNL + N G A W + + +
Sbjct: 63 GGVDRSIEGIVWSTGEEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAG-AIWSIAICDE 121
Query: 425 NTLVAVGTEQGYVNLYNVENDD--IIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIR 595
+AVG + G L+++ I +K++ +Q RIL F +T LV G + I+
Sbjct: 122 TKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDF-QTKDHLVGGCADGVIK 180
Query: 596 VWNVETGHAT--TRISV--SRRGKEVIVWSLVTLENNIIAS 706
VW++ T ++ +R+ V +R+G+ ++W++ +L + I S
Sbjct: 181 VWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVS 221
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 416 SPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TI 592
SPD + GTE + L+++ + Y +F E I F+ +V+GS + T
Sbjct: 369 SPDGKYLVTGTEDRQIKLWDLSTQKVRY--VFSGHEQDIYSLDFSHNGRFIVSGSGDRTA 426
Query: 593 RVWNVETGHATTRISV 640
R+W+VETG ++ +
Sbjct: 427 RLWDVETGQCILKLEI 442
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 530 ILCC-KFNETSSILVTGSVNTIRVWNVETG 616
++CC KF+ L TG V++V+TG
Sbjct: 315 VVCCVKFSNNGKYLATGCNQAANVFDVQTG 344
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 404 CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSV 583
CL SPD +A G G V LY+ + ++I + + GRIL +N S+ L T S+
Sbjct: 484 CLAYSPDGKYLACGDASGKVVLYDANSREVITSR-WAFHTGRILGMSWNAKSTHLATASL 542
Query: 584 NT-IRVWNVE 610
+T I +++VE
Sbjct: 543 DTNIHIYSVE 552
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 40.3 bits (90), Expect = 3e-04
Identities = 39/189 (20%), Positives = 72/189 (38%), Gaps = 3/189 (1%)
Frame = +2
Query: 125 YNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKD 304
Y PV +A+ + A D + ++W H L F + D
Sbjct: 417 YKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSA 476
Query: 305 RLLTTGLGGALVEWNLEEMCIRNTILLTGYA--AWCLDVSPDNTLVAVGTEQGYVNLYNV 478
+LT W++ + + G+ + ++PD +A +G ++L+++
Sbjct: 477 YVLTGSSDKTCRLWDVHRG--HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI 534
Query: 479 ENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRVWNVETGHATTRISVSRRGK 655
I K G I F+ S++LV+G + T+R W+V + +S S G
Sbjct: 535 GTGRRI--KTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGS 592
Query: 656 EVIVWSLVT 682
V +S T
Sbjct: 593 VVTPFSAKT 601
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 38.7 bits (86), Expect = 8e-04
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +2
Query: 404 CLDVSPD-NTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSS----IL 568
CL V+P + VA G+ V L+N + D GR+ C F S +
Sbjct: 388 CLSVNPSVPSFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLA 447
Query: 569 VTGSVNTIRVWNVETGHATTRISVSRRGKEV 661
+GS +RVW+ T + SR +EV
Sbjct: 448 ASGSKGVVRVWDTATNPGVRKAFESRVTEEV 478
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 38.7 bits (86), Expect = 8e-04
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 308 LLTTGLGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVEND 487
L+T L G L W+ + + ++ L G + + LVAV + + + +V+
Sbjct: 504 LVTASLDGILKFWDFNKGNLIDS-LDVGSSITHAIYQHSSDLVAVACDDFGIRIVDVQTR 562
Query: 488 DIIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRVWNVETGHATTRIS 637
I+ ++L+ R+ F++T LVT S++ TIR W++ TGH IS
Sbjct: 563 KIV-RELWG-HSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDSIS 611
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +2
Query: 329 GALVEWNLE-EMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKK 505
GAL WNL + G L +P ++AVGT G + ++N++N I+ +
Sbjct: 183 GALQIWNLRVSKRVHEFQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEF 242
Query: 506 LFDKQEGRILCCKFNETSSILVTGS--VNTIRVWNV 607
KQ+G++L C F + ++ S + + W++
Sbjct: 243 ---KQDGQVLSCSFRTDGTPILASSNPIGDLSFWDL 275
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 407 LDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVN 586
+ VS D ++A ++ + L++ +++ L + G + C FN S L +GS +
Sbjct: 471 IQVSKDGRIIASASQDKTIKLWDSSTGEVV-GVLRGHRRG-VWACSFNPFSRQLASGSGD 528
Query: 587 -TIRVWNVET 613
TIR+WNV+T
Sbjct: 529 RTIRIWNVDT 538
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 407 LDVSPDNTLVAVGTEQGYVNLYNVENDDIIYK 502
LD S D +A G + V L+N+ +D +YK
Sbjct: 370 LDSSEDGVWLATGAKDNTVRLWNLNIEDNVYK 401
Score = 25.4 bits (53), Expect = 8.0
Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 7/178 (3%)
Frame = +2
Query: 104 SVHRIRYYNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVE 283
S RI+ TPV + + N L+ + +++WD+ F G +
Sbjct: 92 SGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSF--RGHGGVIS 149
Query: 284 ALGWVKDR---LLTTGLGGALVE-WNLEEMCIRNTILLTGYAAWC--LDVSPDNTLVAVG 445
AL + K + +L +G + V W+L R+ + G+++ L P + + G
Sbjct: 150 ALCFGKHQNTWVLASGADDSRVRLWDLNSS--RSMAVFEGHSSVIRGLTFEPTGSFLLSG 207
Query: 446 TEQGYVNLYNVENDDIIYK-KLFDKQEGRILCCKFNETSSILVTGSVNTIRVWNVETG 616
+ V ++N++ + +F E E + G N I W+ ++G
Sbjct: 208 SRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSG 265
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/37 (37%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +2
Query: 509 FDKQEGRILCCKFNETSSILVTGSV-NTIRVWNVETG 616
++ G I C N++S+++V+G+ NT+R+W+V+TG
Sbjct: 48 YEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTG 84
Score = 28.7 bits (61), Expect = 0.86
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 395 AAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNE--TSSIL 568
A W D++ +TL+ G + L++V+ +YK F R+ +FNE T +
Sbjct: 54 AIWTCDINKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRV---EFNEDDTRILA 110
Query: 569 VT----GSVNTIRVWNV 607
VT G T+ V+ V
Sbjct: 111 VTEERMGYAGTVTVFRV 127
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.5 bits (78), Expect = 0.008
Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFL-LKFIPAVKDGSVEALGWVKDRLLTTG 322
+N I YN+ + L+ DS + +WD F ++ + KD SV ++ + ++T
Sbjct: 101 INTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKD-SVSSIDIAEHLIVTGS 159
Query: 323 LGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYK 502
G L +++ + + + + + S + + + ++L + E I+
Sbjct: 160 TDGTLRTYDIRKGTLSSDYF--SHPITSVKTSKSASFSLISSLNSSIHLLDQETGKILKS 217
Query: 503 KLFDKQEGRILCCKFNETSSILVTGSVN-TIRVWNVETGHATTRISV 640
+ K + FN++ +I+ +GS + + +W++E T SV
Sbjct: 218 YIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQITSTSV 264
Score = 25.8 bits (54), Expect = 6.1
Identities = 29/163 (17%), Positives = 70/163 (42%), Gaps = 5/163 (3%)
Frame = +2
Query: 143 PVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTTG 322
P+N + YN+ K + A + + +W++ + ++ A + L V D
Sbjct: 16 PINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEY--AGHGHEILDLDLVYDSTKFAS 73
Query: 323 LGG--ALVEWNLEEMCIRNTILLTGYAAW--CLDVSPDNTLVAVGTEQGYVNLYNVENDD 490
GG + W++ + L G+ A + + D++++A G+ V L++ ++
Sbjct: 74 CGGDKFIQVWDVNTGKVDRR--LGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNS 131
Query: 491 IIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRVWNVETG 616
+ + + + + ++VTGS + T+R +++ G
Sbjct: 132 --FSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKG 172
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.017
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 392 YAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILV 571
Y C+ +SPD +A + VN+++ E+ + ++ + + C F+ S+ LV
Sbjct: 217 YITRCV-LSPDVKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLV 275
Query: 572 TGSVNTI-RVWNVETGHATTRIS 637
T S + + R+W + +G + S
Sbjct: 276 TASSDHVARLWELSSGETIRQYS 298
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.017
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Frame = +2
Query: 353 EEMCIRNTILLTGYAAWC--LDVSPDNT-LVAVGTEQGYVNLYNVENDDIIYKKLFDKQE 523
E++ +R T L G++ W L +P+N ++ G+ + L+N+ DD+ Y +
Sbjct: 3 EQLVLRAT--LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT 60
Query: 524 GR---ILCCKFNETSSILVTGSVN-TIRVWNVETGHAT 625
G + C + S ++ S + TIR+W++E G T
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECT 98
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 33.9 bits (74), Expect = 0.023
Identities = 29/161 (18%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVK-DRLLTTG 322
V C++ + + ++ + D +I+IW F + + + W + L +
Sbjct: 57 VTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYR--GISQVKWATGSKYLASA 114
Query: 323 LGGALVE-WNLEEMC-IRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDII 496
+ W+ E+ C +R T Y + +D +P TL+ G+ V ++N+++ +
Sbjct: 115 SDDKTIRIWDFEKRCSVRCLKGHTNYVS-SIDFNPLGTLLVSGSWDETVRIWNLQDGTCL 173
Query: 497 YKKLFDKQEGRILCCKFNETSSILVTGSVNTI-RVWNVETG 616
++ I+ + ++ T S + + R+W+V +G
Sbjct: 174 --RMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSG 212
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 33.1 bits (72), Expect = 0.040
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 422 DNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRV 598
D+ + V T +N+Y+ + +I + ++ EG + F LVTGS + T+RV
Sbjct: 415 DDDKIIVSTCSPRINIYDTKTGVLI--RSLEEHEGDVWT--FEYVGDTLVTGSTDRTVRV 470
Query: 599 WNVETG 616
W++ TG
Sbjct: 471 WDLRTG 476
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.040
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = +2
Query: 311 LTTGLGGA-LVEW-NLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVEN 484
+TTGLG ++EW +L+ + I +C++ SPDN +A+G +L++ +
Sbjct: 169 MTTGLGTVQIMEWPSLKRVY---DIKAHNSNCFCIEFSPDNRHLAIGGADAITSLWDPQ- 224
Query: 485 DDIIYKKLFDKQEGRILCCKFNETSSILVTGSVNT-IRVWNVETGHATTRI 634
++I ++ + + I F+ S L +GS + + + + +TG +I
Sbjct: 225 -ELICERSITRMDYPIRTLSFSYDSRYLASGSEDRYVDIADTKTGDQIWKI 274
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 302 DRLLTTGLGGALVE-WNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNV 478
+R L G A+ W+ +E+ +I Y L S D+ +A G+E YV++ +
Sbjct: 206 NRHLAIGGADAITSLWDPQELICERSITRMDYPIRTLSFSYDSRYLASGSEDRYVDIADT 265
Query: 479 ENDDIIYK 502
+ D I+K
Sbjct: 266 KTGDQIWK 273
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.053
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 2/131 (1%)
Frame = +2
Query: 308 LLTTGLGGALVEWNLEEMCIRNTILLTGYAAWCLDV--SPDNTLVAVGTEQGYVNLYNVE 481
LL+ L+ W+L + W + SP +A G + +Y+
Sbjct: 36 LLSASTNDVLLVWDLHTS--NKVAFFEAPSVWIMTCAFSPSTKSIAAGGLNNFCVVYDTS 93
Query: 482 NDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVNTIRVWNVETGHATTRISVSRRGKEV 661
D +L G + CCK+ + +L T W++E A ISV +G E+
Sbjct: 94 VPDADPVELVG-HAGFVSCCKYVDDGHLLTGSGDKTCMFWDIEQAKA---ISV-LKGHEM 148
Query: 662 IVWSLVTLENN 694
+ SL L +N
Sbjct: 149 DIVSLDFLPSN 159
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 32.3 bits (70), Expect = 0.070
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMT---HFPFLLKFIPAVKDGSVEALGWVKDRLLT 316
V CIA++ L+ +D S+ IW+ T F L +D V +D L++
Sbjct: 381 VKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVS 440
Query: 317 TGLGGALVEWNLEEMCIRNTILLTGY--AAWCLDVSPDNTLVAVGTEQGYVNLY 472
++ W + T L G+ W L SP+ +A G V L+
Sbjct: 441 GSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVFLW 494
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 31.9 bits (69), Expect = 0.092
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Frame = +2
Query: 308 LLTTGLGGALVEWNLEEMCI-RNTILLTGYAA--WCLDVSPDNTLVAVGTEQGYVNLYNV 478
+L G + +N+E+ + R + G + +CLD P N +A+G++ G VN+Y++
Sbjct: 364 MLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLD--PSNKYLAIGSKSGIVNIYDL 421
Query: 479 E--NDDIIYKKL--FDKQEGRILCCKFNETSSILV---TGSVNTIRVWNV 607
+ N D K + D I F++ S +L G +T+R+ +V
Sbjct: 422 QTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTLRLVHV 471
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 31.9 bits (69), Expect = 0.092
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 143 PVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKD--RLLT 316
PV+ +++N L+ D ++ IWD+ +++ +P D V +L + D +
Sbjct: 469 PVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSD--VLSLAFHPDGKEVCV 526
Query: 317 TGLGGALVEWNLEE 358
L G L WN++E
Sbjct: 527 ASLDGQLTFWNVQE 540
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 31.5 bits (68), Expect = 0.12
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 404 CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSV 583
C+ SP + +A GTE+G + ++++++ +IY F + KF+ +L T S
Sbjct: 81 CVQSSPCGSWLAAGTEKGNLYIWSLKSGALIY--FFRAHYQPLTILKFSNDGMVLFTASN 138
Query: 584 N-TIRVWNVET 613
+ + W + T
Sbjct: 139 DGDVFAWLIST 149
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 584 NTIRVWNVETGHATTRISV 640
NTIR+W+V TG+ T I++
Sbjct: 199 NTIRIWDVSTGNLLTTIAL 217
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 31.1 bits (67), Expect = 0.16
Identities = 34/174 (19%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDR-LLTTG 322
V C+ Y+ ++ + KD ++ +WD+ L K GSV L + + R LL +G
Sbjct: 224 VYCVQYD--DEIMVSGSKDRTVSVWDVNSRFILYKLYG--HSGSVLCLDFCRRRNLLVSG 279
Query: 323 LGGA-LVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVE--NDDI 493
+ ++ W+ + R + G+ L V + + ++ ++ +
Sbjct: 280 SSDSTIIIWDWQNR--RPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAE 337
Query: 494 IYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRVWNVETGHATTRISVSRRG 652
+ + +++ + ++VT S + T+R W++ TGH I +RG
Sbjct: 338 ACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG 391
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 503 KLFDKQEGRILCCKFNETSSILVTGSVNTIRVWNVETGHATTRISVSRRGK 655
++ E I +FN+ I+ G T+R+WN TG + SR +
Sbjct: 423 RMLQGHEDLIRTVRFND-EKIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSR 472
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 30.7 bits (66), Expect = 0.21
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 404 CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSV 583
CL ++ +NT + G G+V +YN+ + +++ K G IL + S LV G
Sbjct: 255 CLAMNSENTRLLSGGLDGHVKIYNISDWKVVHGM---KYSGPILSMGLSPDSCNLVVGMS 311
Query: 584 N 586
N
Sbjct: 312 N 312
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.21
Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 10/189 (5%)
Frame = +2
Query: 110 HRIRYYNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEAL 289
H+I + V +A+ QL+ D+ ++IWD + KF + +V+A+
Sbjct: 295 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR--SSIPKFTKTNHNAAVKAV 352
Query: 290 GWV--KDRLLTTGLGGALVE----WNLEEMCIRNTILLTGYAAWCLDVSPDN--TLVAVG 445
W + LL TG GG + + WN NT+ G L SP + + G
Sbjct: 353 AWCPWQSNLLATG-GGTMDKQIHFWNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTHG 410
Query: 446 TEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVT-GSVNTIRVWNVETG-H 619
+++++ + + + + R+L + IL T S ++ W V G H
Sbjct: 411 FPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 470
Query: 620 ATTRISVSR 646
I +++
Sbjct: 471 VKRPIPITK 479
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/94 (20%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +2
Query: 425 NTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRVW 601
N +++V + GYV ++ + + Y K F +L + ++ + +TG+ + +++V+
Sbjct: 59 NYILSVSYD-GYVKFWHKTPNGVEYIKEFHAHNAMLLSAELSQDERLFITGADDKSLKVF 117
Query: 602 NVETGHATTRISVSRRGKEVIVWSLVTLENNIIA 703
+VE+ I + K + ++ +L+ ++IA
Sbjct: 118 DVESIDLVNIIDLEFLPKAICCFNSPSLKTSLIA 151
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 30.3 bits (65), Expect = 0.28
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Frame = +2
Query: 392 YAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKK------------LFDKQEGRIL 535
++AW L VSP L + + VNL+++ + +K+ + + E I
Sbjct: 47 HSAWGLAVSPLRIL-GISSNSHNVNLFHLSPEFKRFKEDYHSPWFRQETLVLEGHEHNIP 105
Query: 536 CCKFNETSSILVTGSVN-TIRVWNV 607
C FN + ++L++GS++ ++++W++
Sbjct: 106 CITFNSSGTLLLSGSIDRSLQIWDI 130
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKF 253
+ CI +N L D S++IWD+T L KF
Sbjct: 104 IPCITFNSSGTLLLSGSIDRSLQIWDITSLSCLCKF 139
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 30.3 bits (65), Expect = 0.28
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = +2
Query: 317 TGLGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDII 496
T + G + W+ C + + G C+D SP+ + G + G + L + E +
Sbjct: 121 TSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLF 180
Query: 497 YKKLFDKQEGRILCCKFNETSSIL-VTGSVNTIRVWNVETG 616
+ + + F+ S++L G I +++V +G
Sbjct: 181 H--VLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSG 219
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 155 IAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTTG 322
+A+N + L A + I+IWD+ + + DG++ A+ W K+ + G
Sbjct: 235 VAFNPVGDLLLSADVEGKIKIWDIDTMECI--STQSETDGAIWAVAWYKNGFIVAG 288
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 29.9 bits (64), Expect = 0.37
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Frame = +2
Query: 191 ARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTT-GLGGALVEWNLEEMCI 367
A ++ IWD + + KF V + + +L + G+ ++V ++L
Sbjct: 163 ATSGENVSIWDYSRDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSP 222
Query: 368 RNTILLTGYAAWCLDVSPDNTLVAV-GTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCK 544
T L+T + +P V G+E + +Y++ N ++ ++
Sbjct: 223 L-TKLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALH-VYKDHVSAVMSVD 280
Query: 545 FNETSSILVTGSVN-TIRVWNVETGHA 622
F+ T V+GS + TIR++NV GH+
Sbjct: 281 FSPTGQEFVSGSYDKTIRIYNVREGHS 307
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 29.1 bits (62), Expect = 0.65
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 455 GYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVN-TIRVWNVETGHAT 625
G + ++N ++ +L +EG + K +E + LV+GS++ T+RVWN+E T
Sbjct: 371 GTIQIHNAITG-VLEARLEGHKEG-VWAVKIHENT--LVSGSIDKTVRVWNIEKAKCT 424
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 29.1 bits (62), Expect = 0.65
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 521 EGRILCCKFNETSSILVTGSVN--TIRVWNVETGHATTRISVSRRG 652
+ I C ++T S + + S N IR+WN ETG +I RRG
Sbjct: 175 DSEISCLGISKTGSKIASSSTNGTLIRIWNSETGE---KICEFRRG 217
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +2
Query: 116 IRYYNPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGW 295
+R +N +PV+ + + L+ A + I++WD+ + F+ V +L +
Sbjct: 522 VRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVK--HSSIVYSLSF 579
Query: 296 VKDRLLTTGLGGALVEWNLEEMCIRNTI 379
D + GGA + N ++ RN +
Sbjct: 580 SYDNKILVS-GGADTDVNFWDLTYRNNL 606
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 407 LDVSPDNT--LVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGS 580
L ++PD+ L+A G++ V ++NV+ +++ I C ++ + I +
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFT--LSGHTAPITCVRWGGQNWIYSSSY 288
Query: 581 VNTIRVWNVETG 616
TIR+W+ + G
Sbjct: 289 DKTIRIWDAKDG 300
Score = 26.6 bits (56), Expect = 3.5
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDR--LLTT 319
VN +++ + ++ A DSS+ +WD FL V +V W D L+++
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHV--AAVYQCAWSTDSRLLVSS 449
Query: 320 GLGGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYN 475
L W++ ++ + + +D SPD VA G V +++
Sbjct: 450 SQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Frame = +2
Query: 383 LTGYAAW--CLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCC----- 541
+ G+ W C+ +PD +++A G+ + ++ + I L + + C
Sbjct: 173 MKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLH 232
Query: 542 -KFNETSSILVTGSV-NTIRVWNVE 610
+ +L +GS NT+R+WNV+
Sbjct: 233 LAPDSGPYLLASGSKDNTVRIWNVK 257
>SPBC14F5.05c |sam1||S-adenosylmethionine synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 382
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 131 PQPTPVNCIAYNKLNKQLSLARKDSSI 211
P+ P+ + +KLN +S+AR+D S+
Sbjct: 134 PEKLPLTILLAHKLNAAMSVARRDGSL 160
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.1 bits (57), Expect = 2.6
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Frame = +2
Query: 311 LTTGLGGALVEWNLEEM-CIRNTILLTGYAAWCLDV--SPDNTLVAVGTEQGYVNLYNVE 481
LTT + G + W+ + + + G W + SPD + +G G V YN+
Sbjct: 368 LTTSIDGVMNVWDHRMVDSVLKYPVPKGVPPWAMSACWSPDGNNIYIGRRNGIVEEYNIH 427
Query: 482 NDDIIYKKL-FDKQEGRILCCKFNETSSILVTGSVNTIRVWNVET 613
+ + L G + LV S + IR++++++
Sbjct: 428 SGKEPVRSLKMPLDSGPVSNVYSMPNGRHLVISSFDNIRLYDLQS 472
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKD 304
V+C + +N Q A + S I + + PF L+ D L W+ D
Sbjct: 587 VDCFKKHSVNSQKKTAPEVSPISVTLIEQIPFFLQKRDISDDSKDAVLSWLSD 639
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 26.6 bits (56), Expect = 3.5
Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +2
Query: 128 NPQPTPVNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGW--VK 301
+P V+ +AY+ L++AR + +EIW+ + DG + + W +
Sbjct: 198 SPTTYEVSSLAYSSDGGFLAIARVNGFVEIWNRKTKNNRCDY-KFHHDGDISCMAWSPIN 256
Query: 302 DRLLTTGLGGALVEWNLEEMCIR--NTILLTGYAAWC-LDVSPDNTLVAVGTEQGYVNLY 472
LL G G + + + +R +TI C L+ + D T A G V ++
Sbjct: 257 WTLLVGGSTGNIYVYRRTKSMMRRVHTIKKVHQEQVCGLEWNYDGTQFASGGNDNLVCIF 316
Query: 473 NVEN 484
++++
Sbjct: 317 DIDS 320
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 419 PDNTLVAVGTEQGYVNLYNVENDDIIYKKLFDKQEGRILCCKFNETSSILVTGSVNTIRV 598
P L G + VN++N ++ +++ R+ C +E IL TIR+
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRV-CTFHHEYPWILSCSDDQTIRI 121
Query: 599 WN 604
WN
Sbjct: 122 WN 123
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 4.6
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -1
Query: 456 PCSVPT-----ATNVLSGLTSRHQAAYPVNNIVFLIHISSRFHSTNAPPNPVVSSLSFTQ 292
P S+PT A N + TSR A Y ++ IH S PP + S++S Q
Sbjct: 458 PESLPTPLLGRAVNTTAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTPPGILTSTISLGQ 517
Query: 291 P 289
P
Sbjct: 518 P 518
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 4.6
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 1/165 (0%)
Frame = +2
Query: 146 VNCIAYNKLNKQLSLARKDSSIEIWDMTHFPFLLKFIPAVKDGSVEALGWVKDRLLTTGL 325
V C+ N+ D +I+IWD+ L + A+ L + G
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGE 225
Query: 326 GGALVEWNLEEMCIRNTILLTGYAAWCLDVSPDNTLVAVGTEQGYVNLYNVENDDIIYKK 505
+ W+LE + + L + P ++ ++++ ++
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVH-- 283
Query: 506 LFDKQEGRILCCKFNETSSILVTGSV-NTIRVWNVETGHATTRIS 637
+ + + E +VTGS+ +TIR+W++ G T ++
Sbjct: 284 VLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLT 328
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 575 GSVNTIRVWNVETGHATTR 631
G+ + IRVWN+E+G T R
Sbjct: 265 GTDDRIRVWNMESGRNTLR 283
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +2
Query: 422 DNTLVAVGTEQGYVNLY-NVENDDI--------IYKKLFDKQEGRILCCKFNETSSILVT 574
D L+ G+ G + LY + EN+ + + +F + +L +LV
Sbjct: 1048 DVALLMTGSSDGTIKLYRDYENEKVELVTSWNSLSDLVFGDRNASLLMSWQQNCGHLLVA 1107
Query: 575 GSVNTIRVWN 604
G V IR+W+
Sbjct: 1108 GDVRVIRIWD 1117
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1183
Score = 25.4 bits (53), Expect = 8.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +2
Query: 470 YNVENDDIIYKKLFDKQEGRILCCKFNETS 559
YN++++ ++Y L + + GR+ E S
Sbjct: 1082 YNIDSEYVVYLSLHESRSGRVYMSPLTEIS 1111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,883,431
Number of Sequences: 5004
Number of extensions: 59053
Number of successful extensions: 268
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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