Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11f20
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein. 96 1e-19
M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA ... 96 1e-19
L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein. 96 1e-19
DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1,... 96 1e-19
BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1,... 96 1e-19
BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1,... 96 1e-19
BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1,... 96 1e-19
BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1,... 96 1e-19
AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein. 96 1e-19
AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding prot... 66 1e-10
M17754-1|AAA51838.1| 395|Homo sapiens BN51T protein. 34 0.41
CR541803-1|CAG46602.1| 398|Homo sapiens POLR3D protein. 34 0.41
CR536509-1|CAG38747.1| 398|Homo sapiens POLR3D protein. 34 0.41
BC004484-1|AAH04484.1| 398|Homo sapiens polymerase (RNA) III (D... 34 0.41
BC002603-1|AAH02603.1| 398|Homo sapiens polymerase (RNA) III (D... 34 0.41
AY092086-1|AAM18216.1| 398|Homo sapiens RNA polymerase III 53 k... 34 0.54
AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein. 32 2.2
M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antige... 31 2.9
L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antige... 31 2.9
AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein. 31 2.9
Y19212-1|CAB76832.1| 551|Homo sapiens cytokeratin protein. 30 8.8
EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating p... 30 8.8
BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating p... 30 8.8
BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating p... 30 8.8
AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating p... 30 8.8
AL833062-1|CAD89974.1| 954|Homo sapiens hypothetical protein pr... 30 8.8
AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein. 30 8.8
>X75913-1|CAA53512.1| 282|Homo sapiens gCIq-R protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>M69039-1|AAA73055.1| 278|Homo sapiens protein ( Human pre-mRNA
splicing factor SF2p32, complete sequence. ).
Length = 278
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 61 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 120
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 121 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 180
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 181 DCHYPEDEVGQEDEAESDIFSIRE 204
>L04636-1|AAA16315.1| 282|Homo sapiens splicing factor protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>DQ372108-1|ABC79624.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>BT019899-1|AAV38702.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>BT019898-1|AAV38701.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>BC013731-1|AAH13731.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>BC000435-1|AAH00435.1| 282|Homo sapiens complement component 1, q
subcomponent binding protein protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>AF338439-1|AAK26580.1| 282|Homo sapiens gC1qR/p32 protein.
Length = 282
Score = 95.9 bits (228), Expect = 1e-19
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Frame = +3
Query: 273 CSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQL 452
C+CGCG +LHT G++ V+FL++EI ERK QK K+LP G+ ++ +G E L +++
Sbjct: 65 CACGCGCGSLHTDGDKAFVDFLSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKV 124
Query: 453 KDETIRVTFNVNH----TVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGF 611
E I VTFN+N+ T D ++ Q +++ E+ S P F V++++ D L
Sbjct: 125 AGEKITVTFNINNSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVL 184
Query: 612 TCSYLQDPPAASADEYNDVFGIDE 683
C Y +D + +D+F I E
Sbjct: 185 DCHYPEDEVGQEDEAESDIFSIRE 208
>AF275902-1|AAF78763.1| 197|Homo sapiens hyaluronan-binding protein
precursor protein.
Length = 197
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Frame = +3
Query: 336 LTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNH----TVDS 503
L++EI ERK QK K+LP G+ ++ +G E L +++ E I VTFN+N+ T D
Sbjct: 1 LSDEIKEERKIQKHKTLPKMSGGWELELNGTEAKLVRKVAGEKITVTFNINNSIPPTFDG 60
Query: 504 DDFEGDVQTEKQEFSEMRSKPQFEVDLVRGD---TTLGFTCSYLQDPPAASADEYNDVFG 674
++ Q +++ E+ S P F V++++ D L C Y +D + +D+F
Sbjct: 61 EEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKKALVLDCHYPEDEVGQEDEAESDIFS 120
Query: 675 IDE 683
I E
Sbjct: 121 IRE 123
>M17754-1|AAA51838.1| 395|Homo sapiens BN51T protein.
Length = 395
Score = 34.3 bits (75), Expect = 0.41
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 306 TKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNV 485
TK E L L + + + Q +K + EV+G + +VVL KQ KD ++ N
Sbjct: 258 TKEEELLFLQLPDTLPGQPPTQDIKPIKTEVQG-----EDGQVVLIKQEKDREAKLAENA 312
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQD 632
D EG V + + Q + V D T+G CS+LQ+
Sbjct: 313 CTLADLT--EGQVG---KLLIRKSGRVQLLLGKVTLDVTMGTACSFLQE 356
>CR541803-1|CAG46602.1| 398|Homo sapiens POLR3D protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.41
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 306 TKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNV 485
TK E L L + + + Q +K + EV+G + +VVL KQ KD ++ N
Sbjct: 261 TKEEELLFLQLPDTLPGQPPTQDIKPIKTEVQG-----EDGQVVLIKQEKDREAKLAENA 315
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQD 632
D EG V + + Q + V D T+G CS+LQ+
Sbjct: 316 CTLADLT--EGQVG---KLLIRKSGRVQLLLGKVTLDVTMGTACSFLQE 359
>CR536509-1|CAG38747.1| 398|Homo sapiens POLR3D protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.41
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 306 TKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNV 485
TK E L L + + + Q +K + EV+G + +VVL KQ KD ++ N
Sbjct: 261 TKEEELLFLQLPDTLPGQPPTQDIKPIKTEVQG-----EDGQVVLIKQEKDREAKLAENA 315
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQD 632
D EG V + + Q + V D T+G CS+LQ+
Sbjct: 316 CTLADLT--EGQVG---KLLIRKSGRVQLLLGKVTLDVTMGTACSFLQE 359
>BC004484-1|AAH04484.1| 398|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide D, 44kDa protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.41
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 306 TKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNV 485
TK E L L + + + Q +K + EV+G + +VVL KQ KD ++ N
Sbjct: 261 TKEEELLFLQLPDTLPGQPPTQDIKPIKTEVQG-----EDGQVVLIKQEKDREAKLAENA 315
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQD 632
D EG V + + Q + V D T+G CS+LQ+
Sbjct: 316 CTLADLT--EGQVG---KLLIRKSGRVQLLLGKVTLDVTMGTACSFLQE 359
>BC002603-1|AAH02603.1| 398|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide D, 44kDa protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.41
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 306 TKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNV 485
TK E L L + + + Q +K + EV+G + +VVL KQ KD ++ N
Sbjct: 261 TKEEELLFLQLPDTLPGQPPTQDIKPIKTEVQG-----EDGQVVLIKQEKDREAKLAENA 315
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQD 632
D EG V + + Q + V D T+G CS+LQ+
Sbjct: 316 CTLADLT--EGQVG---KLLIRKSGRVQLLLGKVTLDVTMGTACSFLQE 359
>AY092086-1|AAM18216.1| 398|Homo sapiens RNA polymerase III 53 kDa
subunit RPC4 protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.54
Identities = 31/109 (28%), Positives = 47/109 (43%)
Frame = +3
Query: 306 TKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNV 485
TK E L L + + + Q +K + EV+G + +VVL KQ KD ++ N
Sbjct: 261 TKEEELLFLQLPDTLPGQPPTQDIKLIKTEVQG-----EDGQVVLIKQEKDREAKLAENA 315
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQD 632
D EG V + + Q + V D T+G CS+LQ+
Sbjct: 316 CTLADLT--EGQVG---KLLIRKSGRVQLLLGKVTLDVTMGTACSFLQE 359
>AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein.
Length = 1111
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 486 NHTVDSDDFEGDVQTEKQEFSEMRSKPQFEVD 581
N+ DSD+ E ++TE EFSE S+ ++ D
Sbjct: 212 NYNYDSDEDEEQMETEDSEFSEQESEDEYSDD 243
>M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2095
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 318 RELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTV 497
REL + E+ AER+ ++V+ L E E + + QL++ T +H
Sbjct: 644 RELETIVREKEAAERELERVRQLTIEAEAKRAAVEENLLNFRNQLEENTFTRRTLEDHLK 703
Query: 498 DSDDFEGDVQTEKQE-FSEMRSKPQFEVDLVR 590
D D++ +K + E+R K E +L++
Sbjct: 704 RKDLSLNDLEQQKNKLMEELRRKRDNEEELLK 735
>L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2649
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 318 RELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTV 497
REL + E+ AER+ ++V+ L E E + + QL++ T +H
Sbjct: 1198 RELETIVREKEAAERELERVRQLTIEAEAKRAAVEENLLNFRNQLEENTFTRRTLEDHLK 1257
Query: 498 DSDDFEGDVQTEKQE-FSEMRSKPQFEVDLVR 590
D D++ +K + E+R K E +L++
Sbjct: 1258 RKDLSLNDLEQQKNKLMEELRRKRDNEEELLK 1289
>AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.
Length = 2649
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 318 RELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTV 497
REL + E+ AER+ ++V+ L E E + + QL++ T +H
Sbjct: 1198 RELETIVREKEAAERELERVRQLTIEAEAKRAAVEENLLNFRNQLEENTFTRRTLEDHLK 1257
Query: 498 DSDDFEGDVQTEKQE-FSEMRSKPQFEVDLVR 590
D D++ +K + E+R K E +L++
Sbjct: 1258 RKDLSLNDLEQQKNKLMEELRRKRDNEEELLK 1289
>Y19212-1|CAB76832.1| 551|Homo sapiens cytokeratin protein.
Length = 551
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 372 KVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSDDFEGDVQTEKQEFSE 551
KVKSLP E+ D L Q+ D ++ ++ + N +D D +V+ + ++ +
Sbjct: 273 KVKSLPEEINFIHSVFDAELSQLQTQVGDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIAN 332
Query: 552 MRSKPQFE 575
RS+ + E
Sbjct: 333 -RSRAEAE 339
>EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating
protein protein.
Length = 2087
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 351 VAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSD 506
V++RK Q+ +S P+E++ +KG AE L +E++ H VD D
Sbjct: 672 VSKRKLQRNESEPSEMKAMALKGGRAEGTLRSAKSEESLTSL----HAVDGD 719
>BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 351 VAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSD 506
V++RK Q+ +S P+E++ +KG AE L +E++ H VD D
Sbjct: 323 VSKRKLQRNESEPSEMKAMALKGGRAEGTLRSAKSEESLTSL----HAVDGD 370
>BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 351 VAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSD 506
V++RK Q+ +S P+E++ +KG AE L +E++ H VD D
Sbjct: 323 VSKRKLQRNESEPSEMKAMALKGGRAEGTLRSAKSEESLTSL----HAVDGD 370
>AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating
protein protein.
Length = 1738
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 351 VAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSD 506
V++RK Q+ +S P+E++ +KG AE L +E++ H VD D
Sbjct: 323 VSKRKLQRNESEPSEMKAMALKGGRAEGTLRSAKSEESLTSL----HAVDGD 370
>AL833062-1|CAD89974.1| 954|Homo sapiens hypothetical protein
protein.
Length = 954
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 351 VAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSD 506
V++RK Q+ +S P+E++ +KG AE L +E++ H VD D
Sbjct: 606 VSKRKLQRNESEPSEMKAMALKGGRAEGTLRSAKSEESLTSL----HAVDGD 653
>AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein.
Length = 1770
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 351 VAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNHTVDSD 506
V++RK Q+ +S P+E++ +KG AE L +E++ H VD D
Sbjct: 355 VSKRKLQRNESEPSEMKAMALKGGRAEGTLRSAKSEESLTSL----HAVDGD 402
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,824,203
Number of Sequences: 237096
Number of extensions: 1979493
Number of successful extensions: 5998
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5998
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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