Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11f10
         (287 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.65 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   4.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   6.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   6.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   6.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    19   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 0.65
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -1

Query: 89   PNSIHTRVITPPPMGK*T*GL-DPLS 15
            P S+H+  + PPP    T  L DP S
Sbjct: 1796 PPSVHSSTVVPPPQHSTTQSLVDPKS 1821


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 4.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 111  HDQHSRALLFRPPRK 155
            +DQHS  + ++PP +
Sbjct: 1007 NDQHSLVVYWKPPAR 1021



 Score = 19.4 bits (38), Expect = 8.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 185 SGRKIVQDCPFAG 147
           +G  ++  CPFAG
Sbjct: 524 AGGTLIVHCPFAG 536


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 284 FFYGGPTTVTRTD 246
           F+YGGP +    D
Sbjct: 354 FYYGGPNSENNLD 366


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 284 FFYGGPTTVTRTD 246
           F+YGGP +    D
Sbjct: 356 FYYGGPNSENNLD 368


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 284 FFYGGPTTVTRTD 246
           F+YGGP +    D
Sbjct: 354 FYYGGPNSENNLD 366


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 278 YGGPTTVTRTDLGG*EKT*PFRSRGCRRLDRSGRK 174
           YG   T+ R DLGG + T P  +    R D++ R+
Sbjct: 101 YGSVGTLGRGDLGGGD-TSPNSALQRARADKTYRR 134


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 45  SHGGRCYNPSMNTIWLTALTKLHDQHSRALLFR 143
           SH        +NT +L ALT  H ++    L++
Sbjct: 2   SHSNPLEAFKLNTFFLKALTVWHVENPTYRLYK 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,016
Number of Sequences: 336
Number of extensions: 1237
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5003479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)