Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11f06
(714 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 27 0.15
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 27 0.15
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 23 1.9
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 23 3.3
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 5.7
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 5.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 5.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 5.7
EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport pe... 21 7.5
EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport pe... 21 7.5
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 7.5
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 27.1 bits (57), Expect = 0.15
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -1
Query: 231 PVLPKFS*KNRDFAISLYF*IFGFEFDDCPFCHRFPFVLPLSF-DLNLPIL-VFHNTKQM 58
P+L K + + SLYF IFG+ +DD V+P +F D+ LP+L + NT ++
Sbjct: 241 PLLMKIASQFVGIFCSLYFCIFGYIYDD-------EMVVPQNFHDIFLPLLCILTNTLEI 293
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 27.1 bits (57), Expect = 0.15
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -1
Query: 231 PVLPKFS*KNRDFAISLYF*IFGFEFDDCPFCHRFPFVLPLSF-DLNLPIL-VFHNTKQM 58
P+L K + + SLYF IFG+ +DD V+P +F D+ LP+L + NT ++
Sbjct: 66 PLLMKIASQFVGIFCSLYFCIFGYIYDD-------EMVVPQNFHDIFLPLLCILTNTLEI 118
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2
Query: 368 RLRS*PTYFQALLLWSVHFQHLILFC 291
RL++ YF + W++ F H+ C
Sbjct: 143 RLKNCVIYFNRIFGWNILFGHIFTVC 168
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 584 EYFAALMETLKASELEDNLVATITLL 661
E F +L+ L+ + +NL+ T+T+L
Sbjct: 195 EQFVSLVRELRGAFKAENLLVTLTVL 220
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.8 bits (44), Expect = 5.7
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = +2
Query: 200 RFFQENLGSTGLTQQAVSKHEAMMTYGHKSNKTKSDAENELTIVKELENMSVKT 361
R + +L +GL S+H G N + E L + K + +KT
Sbjct: 148 RRLEMSLEKSGLFSSKTSEHSVDELSGKSDNDAEEYDEQSLRVPKVNSHGKIKT 201
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +2
Query: 278 GHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGT 397
GH+ ++T ++ + LE+ + D+G + + S T
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSST 194
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +2
Query: 278 GHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGT 397
GH+ ++T ++ + LE+ + D+G + + S T
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSST 194
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +2
Query: 278 GHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGT 397
GH+ ++T ++ + LE+ + D+G + + S T
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSST 194
>EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport
peptide isoform C protein.
Length = 136
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 578 TTEYFAALMETLKASELE 631
TT+YF ++TL+ S+ E
Sbjct: 91 TTDYFKGCIDTLQRSDEE 108
>EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport
peptide isoform A protein.
Length = 140
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 578 TTEYFAALMETLKASELE 631
TT+YF ++TL+ S+ E
Sbjct: 91 TTDYFKGCIDTLQRSDEE 108
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 601 KSSKVFRCSLFTSLFFDNFSHSRQHC*HFLVQCI 500
K ++ FRC +F S+ + FL+QC+
Sbjct: 40 KGARTFRCVFVLDPWFAGSSNVGINKWRFLLQCL 73
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,637
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -