Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11e23
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   5.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.9  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.1  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   9.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.1  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 597 RFSSDHHRSNGTLSSITAPVGPSPIFFPSP 508
           R S  HH ++   ++ T P G     FPSP
Sbjct: 38  RTSYQHHFNSPAGNAHTGPTGTHDAGFPSP 67


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 656 GCLTGNCIRDGIELVFILSTDSL 588
           GCL  NC R G    F +S +++
Sbjct: 20  GCLITNCPRGGKRSKFAISENAV 42



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 101 IVLFMAESI*SSCVA*NC 48
           I+L ++ES+ S C+  NC
Sbjct: 9   ILLVLSESLVSGCLITNC 26


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 662 SLGCLTGNCIRDGI 621
           SL C  GNCI  G+
Sbjct: 121 SLACGDGNCIERGL 134


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 549 TAPVGPSPIFFPSPVTRMS 493
           ++P G SP F P   T+ S
Sbjct: 29  SSPAGRSPAFLPHHFTKRS 47


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 549 TAPVGPSPIFFPSPVTRMS 493
           ++P G SP F P   T+ S
Sbjct: 29  SSPAGRSPAFLPHHFTKRS 47


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 549 TAPVGPSPIFFPSPVTRMS 493
           ++P G SP F P   T+ S
Sbjct: 29  SSPAGRSPAFLPHHFTKRS 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.124    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,206
Number of Sequences: 336
Number of extensions: 2515
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)