Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11e23
(666 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein. 32 1.6
AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein. 32 1.6
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 32 1.6
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 32 1.6
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.7
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.7
BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for IM... 31 3.7
BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for IM... 31 3.7
BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein. 31 3.7
AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-... 31 3.7
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 3.7
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.7
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 3.7
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 3.7
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 31 3.7
>AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein.
Length = 614
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 579
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 563 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 607
>AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein.
Length = 583
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 579
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 532 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 576
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 579
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 1290 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 1334
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPV 579
++ +++ D D + R +RGRE+ RR T R +R++S TPV
Sbjct: 1235 ERERERERDRGDRDRDRERDRERGRERDRRDTKR-HSRSRSRSTPV 1279
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for
IMAGE:4122390) protein.
Length = 465
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for
IMAGE:3538108) protein.
Length = 474
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein.
Length = 465
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-27
protein.
Length = 148
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 9 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 45
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 296 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 332
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 296 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 332
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 31.1 bits (67), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 442 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 552
K + +D DS +++HS R RE+ R R RN
Sbjct: 407 KDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRN 443
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.124 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,396,469
Number of Sequences: 237096
Number of extensions: 1591179
Number of successful extensions: 6514
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6513
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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