Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11e22
         (522 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053359-1|AAH53359.1|  406|Homo sapiens LCOR protein protein.         37   0.049
AL834245-1|CAD38921.2|  433|Homo sapiens hypothetical protein pr...    37   0.049
AL832044-1|CAD91160.1|  200|Homo sapiens hypothetical protein pr...    37   0.049
AL442123-1|CAH70915.1|  433|Homo sapiens novel protein (likely o...    37   0.049
AB058698-1|BAB47424.1|  572|Homo sapiens KIAA1795 protein protein.     37   0.049
AK055258-1|BAB70892.1|  213|Homo sapiens protein ( Homo sapiens ...    35   0.20 
AF196473-1|AAF42816.1|  117|Homo sapiens immunoglobulin heavy ch...    30   5.7  

>BC053359-1|AAH53359.1|  406|Homo sapiens LCOR protein protein.
          Length = 406

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 RTYTEDELXSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNK 305
           R Y  + L  A+  + SG++   +A  +YGIP STL  KV +
Sbjct: 347 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKE 388


>AL834245-1|CAD38921.2|  433|Homo sapiens hypothetical protein
           protein.
          Length = 433

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 RTYTEDELXSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNK 305
           R Y  + L  A+  + SG++   +A  +YGIP STL  KV +
Sbjct: 347 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKE 388


>AL832044-1|CAD91160.1|  200|Homo sapiens hypothetical protein
           protein.
          Length = 200

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 RTYTEDELXSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNK 305
           R Y  + L  A+  + SG++   +A  +YGIP STL  KV +
Sbjct: 114 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKE 155


>AL442123-1|CAH70915.1|  433|Homo sapiens novel protein (likely
           ortholog of mouse transcription factor MLR2)(MLR2)
           protein.
          Length = 433

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 RTYTEDELXSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNK 305
           R Y  + L  A+  + SG++   +A  +YGIP STL  KV +
Sbjct: 347 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKE 388


>AB058698-1|BAB47424.1|  572|Homo sapiens KIAA1795 protein protein.
          Length = 572

 Score = 36.7 bits (81), Expect = 0.049
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 RTYTEDELXSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNK 305
           R Y  + L  A+  + SG++   +A  +YGIP STL  KV +
Sbjct: 486 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKE 527


>AK055258-1|BAB70892.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30696 fis, clone FCBBF2000808. ).
          Length = 213

 Score = 34.7 bits (76), Expect = 0.20
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 180 RTYTEDELXSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNK 305
           R Y  + +  A+  + SG++   +A  +YG+P STL  KV +
Sbjct: 134 RQYDHEIMEEAIAMVMSGKMSVSKAQGIYGVPHSTLEYKVKE 175


>AF196473-1|AAF42816.1|  117|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 117

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 214 CATSSRGGSARDGLPCF 264
           CA SSRGG   DG+PC+
Sbjct: 97  CAHSSRGGDYIDGMPCY 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,161,005
Number of Sequences: 237096
Number of extensions: 836230
Number of successful extensions: 2064
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)