Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11e19
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   3.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.9  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   7.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.9  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   7.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 386 SRGIVPWNRCLEHNYTREIVRLMTTLPVPS 475
           SRG     RC+  ++ +++VR+++ L  PS
Sbjct: 143 SRGCTAVLRCVVPSFVKDLVRVVSWLQEPS 172


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 386 SRGIVPWNRCLEHNYTREIVRLMTTLPVPS 475
           SRG     RC+  ++ +++VR+++ L  PS
Sbjct: 143 SRGCTAVLRCVVPSFVKDLVRVVSWLQEPS 172


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 141 LGQFCVIYFFLLTTSLLV 194
           +G+  +I FF+LTT L++
Sbjct: 1   MGRITIIRFFVLTTMLMM 18


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 48  CFNKNRTHERH 16
           C+N++RT ERH
Sbjct: 329 CWNEHRTLERH 339


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 331 DNCNKLLNL 305
           DNCNK+ NL
Sbjct: 121 DNCNKIYNL 129


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 48  CFNKNRTHERH 16
           C+N++RT ERH
Sbjct: 329 CWNEHRTLERH 339


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 331 DNCNKLLNL 305
           DNCNK+ NL
Sbjct: 121 DNCNKIYNL 129


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 48  CFNKNRTHERH 16
           C+N++RT ERH
Sbjct: 329 CWNEHRTLERH 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,299
Number of Sequences: 438
Number of extensions: 3940
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)