Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11e08
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    29   0.029
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    29   0.038
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 29.5 bits (63), Expect = 0.029
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
 Frame = +2

Query: 452 LATFRGIFNVLHL*VRKQQCYVS-ESTLAFHIL--------FKNKTLILCIVMSSCFNYV 604
           L TF   F ++++     QCY + E +  F ++        F+  +L  C+ + S F YV
Sbjct: 271 LLTFWSAFFIVNVLYICNQCYNTVEESRIFGLVTFTPDRSKFRPSSLRFCLNILSIFTYV 330

Query: 605 PVILKRLY-IFSYDNFV 652
           P+IL  +Y   +YD+F+
Sbjct: 331 PMILYCVYTTATYDSFM 347


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 548 FKNKTLILCIVMSSCFNYVPVILKRLY-IFSYDNFV 652
           F+  +L  C+ + S F YVP+IL  +Y   +YD+F+
Sbjct: 37  FRPSSLRFCLNILSIFTYVPMILYCVYTTATYDSFM 72


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 405 YYNLLDRTVSSRKYLNW 455
           YYNL D    SRK L W
Sbjct: 92  YYNLADPARDSRKGLFW 108


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 11  FGFYLCFCRSVCLLTKASSNCDIYFCFFVVILLCCW 118
           F  +L F     + T     C  YF +  +ILLC +
Sbjct: 79  FTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVY 114


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2

Query: 398 HLNSSI*K*DS*IDYNLRIEKFRSKFFIFFDSIR 297
           +LNS+I    + I YNL   KFR+ F I  +S R
Sbjct: 341 YLNSAI----NPILYNLMSSKFRTGFIICSESNR 370


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +2

Query: 26  CFCRSVCL--LTKASSNCDIYFCFFVVIL 106
           C  R + L  L+K S    I FC FVV+L
Sbjct: 163 CLYRWIVLYTLSKMSQVMLIQFCAFVVVL 191


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 150 WSSWGIKTTTLQQHNKITTKKQKYMS 73
           WS   I + TL+QH    +  Q  +S
Sbjct: 219 WSPASIDSFTLEQHRSWCSSSQPVLS 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,565
Number of Sequences: 336
Number of extensions: 3751
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)