Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11e08
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-317|AAN13254.1|   75|Drosophila melanogaster CG31545-PA...    30   2.8  
BT016114-1|AAV36999.1|  949|Drosophila melanogaster LD10780p pro...    29   4.8  
AE013599-1182|AAF58744.1|  949|Drosophila melanogaster CG12325-P...    29   4.8  
AE014298-544|AAF45885.2|  159|Drosophila melanogaster CG13317-PA...    29   8.5  

>AE014297-317|AAN13254.1|   75|Drosophila melanogaster CG31545-PA
           protein.
          Length = 75

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 485 HL*VRKQQCYVSESTLAFHILFKNKTLILCIVMSSC 592
           H     +QC+++ STL+F  LF    + LCI +  C
Sbjct: 4   HTVTHLRQCFLAASTLSFSSLFIYLPIYLCICIPKC 39


>BT016114-1|AAV36999.1|  949|Drosophila melanogaster LD10780p
           protein.
          Length = 949

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 536 FHILFKNKTLILCIVMSSCFNYVPVILKRLYIFSYDNFVWL 658
           F +  +N  LI C        Y P +L+R ++  +D+  WL
Sbjct: 111 FAVAVQNVVLIFCAPGEITGEYNPFVLRRRFLGGFDDVTWL 151


>AE013599-1182|AAF58744.1|  949|Drosophila melanogaster CG12325-PA
           protein.
          Length = 949

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 536 FHILFKNKTLILCIVMSSCFNYVPVILKRLYIFSYDNFVWL 658
           F +  +N  LI C        Y P +L+R ++  +D+  WL
Sbjct: 111 FAVAVQNVVLIFCAPGEITGEYNPFVLRRRFLGGFDDVTWL 151


>AE014298-544|AAF45885.2|  159|Drosophila melanogaster CG13317-PA
           protein.
          Length = 159

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +2

Query: 200 YINYLNLFSDTLRLRTSTGS*RCTRFPGPKIGAECCRKI*KTWSE 334
           ++NY N+F   LR R S G+        P I  ECC K   TW E
Sbjct: 111 HVNYANMF---LRSRRSDGN-------TPSISNECCTKAGCTWEE 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,561,066
Number of Sequences: 53049
Number of extensions: 577734
Number of successful extensions: 1129
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)