Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11d23
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 64 1e-10
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 61 9e-10
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 57 1e-08
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 46 4e-05
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 34 0.090
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 32 0.48
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 30 1.5
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 1.5
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846... 29 4.5
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398... 29 4.5
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 29 4.5
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 5.9
01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 28 5.9
11_01_0560 - 4413174-4414469 28 7.8
08_01_0686 + 6049563-6050900 28 7.8
08_01_0070 + 490655-493165 28 7.8
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 63.7 bits (148), Expect = 1e-10
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +2
Query: 278 DEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEV-GLMNGH---IPEHCGGM 445
D Q+ +E KF ++ I P A D + +P V W++ G N H PE GGM
Sbjct: 33 DTQEQFKESVHKFAQETIAPHAAAIDASNHFPKDV--NLWKLMGDFNLHGLTAPEEYGGM 90
Query: 446 DMGVFDGCLVAEEL--AYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVA 619
+G C+ EE+ A G G+ S L ++ G+ Q+ KYL +LI V
Sbjct: 91 GLGYMYHCIAMEEISRASGSVGLSYGAH-SNLCINQLVRHGSPAQKLKYLPKLISGEHVG 149
Query: 620 AYGVTEPGAGSDVAGIK 670
A ++EP +GSDV +K
Sbjct: 150 ALAMSEPNSGSDVVSMK 166
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 60.9 bits (141), Expect = 9e-10
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGMD 448
LT+E+K LQ R+F ++E+ P+ ++ + E+P+ ++ K +G+ G I + C G+
Sbjct: 61 LTEEEKDLQIKVRQFMENEVAPIISKFWEKAEFPFHLIPKMSTLGIAGGTIKGYGCPGLS 120
Query: 449 MGVFDGCLVAEELAYGCTGIMT-AMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAY 625
C + E+A I + + S L + G++ Q++KYL L V Y
Sbjct: 121 GPACAMCFL--EIARVDASIASFCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQKVCVY 178
Query: 626 GVTEPGAGSDVAGIKT 673
++EP GSD + + T
Sbjct: 179 ALSEPNHGSDASSLNT 194
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGMD 448
LT E++++++ R + EI P+ Y + E+P+ + K +G+ G I + C G+
Sbjct: 50 LTTEEQSIRKNVRAIMEKEIAPIMATYWEKAEFPFHAIPKLSSLGVAGGTIKGYGCPGLS 109
Query: 449 MGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYG 628
+ +AE + + S L + + G++ Q++KYL L V +
Sbjct: 110 ITA-SAITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWA 168
Query: 629 VTEPGAGSDVAGIKT 673
+TEP GSD + + T
Sbjct: 169 LTEPNHGSDASSLIT 183
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/134 (23%), Positives = 61/134 (45%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 451
LTDE+K L++ R + EI P+ +Y + E+P+ + K +GL
Sbjct: 47 LTDEEKTLRKKVRGIMEREIAPIMTEYWEKAEFPFHAIPKLATLGLAG------------ 94
Query: 452 GVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGV 631
G ++ Y + + + + S + + G++ Q++KYL L + + +
Sbjct: 95 ----GTTKTDQDNYFLSSLFLSFQFS----VQIALCGSEAQKQKYLPSLTQFRTIGCWAL 146
Query: 632 TEPGAGSDVAGIKT 673
TEP GSD + ++T
Sbjct: 147 TEPDYGSDASSLRT 160
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 34.3 bits (75), Expect = 0.090
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 560 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 673
G +EQQKK+L ++ Y TE G GS+V G++T
Sbjct: 119 GTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLET 156
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 495 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
P + S + PS +P S P S P PTS A+ T GYSP SY P +
Sbjct: 1685 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTS 1736
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 495 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
P + S + PS +P S P S P PTS A+ T YSP SY P +
Sbjct: 1622 PTSPSYSPTSPSYSPTS--PSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTS 1673
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 495 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PATGMIS 325
P + S + PS +P S P S P PTS ++ T YSP SY P + + S
Sbjct: 1594 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYS 1649
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 495 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
P + S + PS +P S P S P PTS ++ T YSP SY P +
Sbjct: 1664 PTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1715
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = -1
Query: 537 PSPLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPV 358
PS S A P H Y+ SS P + P S P PTS ++ YSP
Sbjct: 1744 PSYNPSSAKYSPSHAYSPSSPRLSPYS---QTSPNYSPTSPTYSPTSPSYSQPSPSYSPT 1800
Query: 357 LSY 349
Y
Sbjct: 1801 SPY 1803
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 560 GNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIK 670
G KEQQK++L L++ + + + +TEP A SD I+
Sbjct: 509 GTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIE 546
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = -1
Query: 663 PATSDPAPGSVTP*AATNG-SSISLPRYFFCCSLF-PA-IMTGVWPSPLASI-AVIIPVH 496
P P PGS T + N S P C L P+ + T + SP + I + P+
Sbjct: 1596 PPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPI- 1654
Query: 495 PYASSSATRQPSNTPMS-IPPQCSGMCPFIRPTSQAFFTTGHGYSP 361
Y+ SS P++ S P S P PTS A+ T Y+P
Sbjct: 1655 -YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1699
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Frame = -1
Query: 672 VFIPATS--DPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMTGVWPSPLASIAVIIPV 499
V+ P +S P S P + + S + P Y + T SP + P
Sbjct: 1682 VYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPT 1741
Query: 498 HP-YASSSATRQPSNTPMS-IPPQCSGMCPFIRPTSQAFFTTGHGYSP 361
P Y+ +S + P++ S P S P PTS A+ T YSP
Sbjct: 1742 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSP 1789
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 495 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
P + S + PS +P S P S PTS A+ T GYSP SY P++
Sbjct: 1754 PTSPSYSPTSPSYSPTS--PSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSS 1805
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -1
Query: 504 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
P P S S T PS +P S S P PTS ++ T YSP SY P +
Sbjct: 1715 PTSPSYSYSPT-SPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1770
>05_04_0443 -
21283680-21283940,21284044-21284118,21284620-21284649,
21286744-21287247
Length = 289
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 522 SIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVLS 352
S A ++P P + A+ S++P +PP +G P + P S + P+ S
Sbjct: 31 SAAAVLPARPPSPPRASIPVSSSPPLLPPPVAGSKPQLPPFSSSSSVASSSSPPLPS 87
>03_02_0875 +
12038365-12039329,12039417-12039593,12039651-12039893,
12040045-12040124,12040242-12040508,12040599-12040710,
12040757-12041071,12041357-12041366
Length = 722
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 510 IIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 391
++P ASSS T +++P + Q SG CP P+S A
Sbjct: 63 LLPPPQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWA 102
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 350 IDPPQE*FHPS*IYALVPEALSAHRLIRNKS 258
+DPP++ HPS I AL ALS + + KS
Sbjct: 362 VDPPRKGLHPSVICALQKVALSERKAYKAKS 392
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 500 CIRMQAPQPQDNHQTHPCPYHRNVLECVR 414
CI+ + P+ Q CP+ RN+ C R
Sbjct: 197 CIKNKYPEMQQAEVRDKCPFCRNICNCTR 225
>01_06_0736 -
31585840-31586459,31586545-31587070,31588051-31588149,
31589344-31589427,31589458-31589775,31589907-31590113
Length = 617
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 470 DNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHID 345
DN++ + Y+ +VL + S GQL P PP+ ++D
Sbjct: 253 DNYKMYLPGYNSDVLNNLESTGQLEYPQFNLPQELPPNAYLD 294
>11_01_0560 - 4413174-4414469
Length = 431
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 486 SSSATRQPSNTPMSIPPQCSGMCPFI 409
SSSAT PS++ +S PP S + P I
Sbjct: 249 SSSATTTPSDSSLSSPPSLSSVFPRI 274
>08_01_0686 + 6049563-6050900
Length = 445
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 350 IDPPQE*FHPS*IYALVPEALSAHRLIRNK 261
IDPP FH S +Y V E LS L NK
Sbjct: 310 IDPPPTVFHQSWLYVSVDERLSLLYLCDNK 339
>08_01_0070 + 490655-493165
Length = 836
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 528 LASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRP 403
LA++AV +P H +A RQ S +S P + +C +RP
Sbjct: 17 LAAVAVFLPGH-----AAARQFSTVAISNSPDATVVCALVRP 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,728,497
Number of Sequences: 37544
Number of extensions: 431057
Number of successful extensions: 1306
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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