Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11d23
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    26   1.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.8  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   5.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.7  

>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 440 HRNVLECVRSLGQLPKPSLQRATG 369
           H+N  ECV+  G LPK + +  +G
Sbjct: 57  HQNARECVKETGILPKNAFRVLSG 80


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 555  IMTGVWPSPLASIAVIIPVHPYASSSATRQPSNTPM 448
            I+T    SPL S     P  P A SS  +  SNTP+
Sbjct: 1329 IVTSFTDSPLFSRRNRQPKAPDADSSKPQSESNTPI 1364


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = -1

Query: 666 IPATSDPA--PGSVTP*AATNGSSI--SLPRYFFCCSLFPAIMTGVWPSPLASIAVIIPV 499
           +PA+  P   P    P   + G+ I  S P+     S  P +  G  P P    +   PV
Sbjct: 42  LPASKMPTSYPSLPAPIVPSPGAPIQQSRPQAVTVRSSAPMLPKGGLP-PKGVPSSASPV 100

Query: 498 HPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 391
           +   +SS   + ++ P+ +PP      P  +PT +A
Sbjct: 101 YMSPASSLMTKATSLPLGVPP----FRPIPKPTPEA 132


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 530 HWLPLRS*FRCIRMQAPQPQDNHQTHPCPYHRNVL 426
           H+LPL+   +      PQ Q  H  H   Y R V+
Sbjct: 604 HYLPLQQQQQQQARHLPQQQAIHHIHQQQYPRQVI 638


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,089
Number of Sequences: 2352
Number of extensions: 16435
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)