Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11d23
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 168 3e-42
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 156 2e-38
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 153 1e-37
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 77 2e-14
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 75 6e-14
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 75 6e-14
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 75 6e-14
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 60 1e-09
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 57 1e-08
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 56 2e-08
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 53 2e-07
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical pr... 34 0.081
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 34 0.081
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 31 0.99
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 2.3
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 2.3
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 2.3
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 2.3
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 2.3
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 2.3
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 7.0
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 7.0
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 7.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 27 9.2
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 27 9.2
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 27 9.2
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 27 9.2
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 27 9.2
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 27 9.2
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 27 9.2
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 27 9.2
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 27 9.2
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 168 bits (409), Expect = 3e-42
Identities = 74/141 (52%), Positives = 102/141 (72%)
Frame = +2
Query: 251 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 430
+TG F+LT +Q + RKF DE+IPVAG+YDKT EYPW ++KKA G + IPE
Sbjct: 21 STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80
Query: 431 HCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEP 610
GG+ + + C+++EE+AYGC+GI TA+ A+ L TP+I+ N + +K++LGR+ID P
Sbjct: 81 AYGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMIDNP 140
Query: 611 LVAAYGVTEPGAGSDVAGIKT 673
VA+Y VTEPGAGSDVAG+KT
Sbjct: 141 FVASYAVTEPGAGSDVAGVKT 161
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 156 bits (378), Expect = 2e-38
Identities = 69/136 (50%), Positives = 97/136 (71%)
Frame = +2
Query: 266 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 445
F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A +GLMN IPE GG
Sbjct: 29 FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88
Query: 446 DMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAY 625
M + L+ E L+YGCTGI + L PV I+GN+EQ+KKYLG L EP++A+Y
Sbjct: 89 GMTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIASY 148
Query: 626 GVTEPGAGSDVAGIKT 673
VTEPGAGSDV G+KT
Sbjct: 149 CVTEPGAGSDVNGVKT 164
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 153 bits (370), Expect = 1e-37
Identities = 68/136 (50%), Positives = 95/136 (69%)
Frame = +2
Query: 266 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 445
FEL+D QK +Q A KF+KD ++P A ++DK+GE+PW +VK+A +G MN IPE GG
Sbjct: 23 FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82
Query: 446 DMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAY 625
+ D L+ E L+YGC+G+ A+ L P+ ++G +EQ+KKYLG L EP++A+Y
Sbjct: 83 GLSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASY 142
Query: 626 GVTEPGAGSDVAGIKT 673
VTEPGAGSDV G+KT
Sbjct: 143 CVTEPGAGSDVNGVKT 158
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 451
LT+ + + RKF+KD + P+ + DK + V + +E GLM H+PE GG
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 452 GVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYG 628
F+ +V EELA + + + L + +I G +EQ+ KYL RL + L A++
Sbjct: 108 SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRLCSDSL-ASFC 166
Query: 629 VTEPGAGSDVAGIKT 673
++E GAGSD +KT
Sbjct: 167 ISESGAGSDAFALKT 181
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 74.5 bits (175), Expect = 6e-14
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +2
Query: 248 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 421
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 422 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKYLGRL 598
P GG M F + EEL+ GI + A S L ++ G++EQ+KKYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
Query: 599 IDEPLVAAYGVTEPGAGSDVAGIK 670
I + A ++E AGSDV +K
Sbjct: 151 ISGEHMGALAMSEAQAGSDVVSMK 174
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 74.5 bits (175), Expect = 6e-14
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = +2
Query: 269 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMD 448
+L++E+ ++ R+F + I P+ + D + V+ +E GLM IPE GG
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 449 MGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVII-AGNKEQQKKYLGRLIDEPLVAAY 625
FD LV EELA + ++ P+II G +EQ++KYL +++ E + ++
Sbjct: 99 SSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVTE-AIGSF 157
Query: 626 GVTEPGAGSDVAGIKT 673
++E G+GSD +KT
Sbjct: 158 ALSETGSGSDAFALKT 173
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 74.5 bits (175), Expect = 6e-14
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +2
Query: 248 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 421
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 422 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKYLGRL 598
P GG M F + EEL+ GI + A S L ++ G++EQ+KKYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
Query: 599 IDEPLVAAYGVTEPGAGSDVAGIK 670
I + A ++E AGSDV +K
Sbjct: 151 ISGEHMGALAMSEAQAGSDVVSMK 174
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/125 (28%), Positives = 59/125 (47%)
Frame = +2
Query: 299 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVA 478
E A +F K E+ P +DK GE P V++KA E+G + GG + ++
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIF 95
Query: 479 EELAYGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDV 658
E+L+ GC + + + G ++ ++ L + + +Y +TEP AGSD
Sbjct: 96 EQLSMGCVSTAAYISIHNMCAWMLDTYGPEKLKEDLLPDMAVFKKLGSYCLTEPDAGSDA 155
Query: 659 AGIKT 673
A I+T
Sbjct: 156 ASIRT 160
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 58.0 bits (134), Expect = 6e-09
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 290 ALQELARKFTKDEIIPVAGQYDKTGEYPWPVV-KKAWEVGLMNGHIPEHCGGMDMGVFDG 466
A+Q K K++I P Q++K+G YP V K ++G+ + P GG
Sbjct: 31 AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMS 90
Query: 467 CLVAEEL-AYGCTGI-MTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEP 640
+AE++ A C I M+ M S + + G+ + ++L I+ LV++ V+EP
Sbjct: 91 IAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEP 150
Query: 641 GAGSDVAGIKT 673
AGSDV+ I+T
Sbjct: 151 HAGSDVSAIRT 161
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 451
L + +K L E + F + + P+ + D+ ++KKA+++ LM I GG +
Sbjct: 36 LNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKYGGSGV 95
Query: 452 GVFDGCLVAEELAYGCTGIMTAMEASGLGQTPVIIA-GNKEQQKKYLGRLIDEPLVAAYG 628
F+ L EEL+ I M P+I GN+E ++KYL +L + V A+
Sbjct: 96 SFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLKKLCKDS-VGAFA 154
Query: 629 VTEPGAGSDVAGIKT 673
++E +GSD ++T
Sbjct: 155 LSEVVSGSDAFAMQT 169
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +2
Query: 353 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASG 532
D+T E V+ +E GLM +PE GG FD LV EE++ + ++
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHN 61
Query: 533 LGQTPVII-AGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 673
P+II G ++Q++KYL + V ++ ++E G+GSD +KT
Sbjct: 62 TLFIPLIIELGTEKQKEKYLPKCYTSS-VGSFALSETGSGSDAFALKT 108
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 410 MNGHIPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKY 586
M H+PE GG F+ +V EELA + + + L + +I G +EQ+ KY
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 587 LGRLIDEPLVAAYGVTEPGAGSDVAGIKT 673
L RL + L A++ ++E GAGSD +KT
Sbjct: 61 LPRLCSDSL-ASFCISESGAGSDAFALKT 88
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/137 (22%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = +2
Query: 269 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGM 445
+LT+++++L AR++ ++ ++P + +T ++ ++ + +GL+ + C G
Sbjct: 31 QLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQGYGCAGT 90
Query: 446 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAA 622
+ L+A E+ +G + M + L P+ G+++Q++KY+ L +
Sbjct: 91 STVGYG--LIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGC 148
Query: 623 YGVTEPGAGSDVAGIKT 673
+G+TEP GS+ G++T
Sbjct: 149 FGLTEPNHGSNPGGMET 165
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 51.6 bits (118), Expect = 5e-07
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +2
Query: 293 LQELARKFTKDEIIPVAGQYDKTGEYPWPVV-KKAWEVGLMNGHIPEHCGGMDMGVFDGC 469
+Q+ K +++I P ++++ G YP +V K + G+ + PE GG +
Sbjct: 66 MQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGTDIAMAT 125
Query: 470 LVAEEL-AYGCTGI-MTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPG 643
+AE++ A C I M+ M + + + G+ ++++L I LV++ V+EP
Sbjct: 126 AIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGSDALRERFLRPSITGDLVSSLAVSEPH 185
Query: 644 AGSDVAGIKT 673
AGSDV+ + T
Sbjct: 186 AGSDVSAVHT 195
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 445
+TDEQK + + ++ V + D+T + P V+ + E+G +P G
Sbjct: 63 MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122
Query: 446 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAA 622
VAE + G M A +G +++ G Q++KYL L AA
Sbjct: 123 GFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFAA 182
Query: 623 YGVTEPGAGSDVAGIKT 673
+ +TEP GSD + ++T
Sbjct: 183 FALTEPTTGSDASSVRT 199
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Frame = +2
Query: 272 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 445
+TDEQK + + ++ V + D+T + P V+ + E+G +P G
Sbjct: 63 MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122
Query: 446 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAA 622
VAE + G M A +G +++ G Q++KYL L AA
Sbjct: 123 GFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFAA 182
Query: 623 YGVTEPGAGSDVAGIKT 673
+ +TEP GSD + ++T
Sbjct: 183 FALTEPTTGSDASSVRT 199
>Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical
protein F08A8.4 protein.
Length = 662
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 545 PVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 673
P +++ +KEQQ+K+LGR ++ Y TE G G+++ ++T
Sbjct: 121 PALVSQASKEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLET 164
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 545 PVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKT 673
P ++A ++EQQ+K+LGR + ++ Y TE G G+++ ++T
Sbjct: 119 PTLVAQASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLET 162
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 482 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPP 360
P PQ HP P+H V S P LQ A+ TPP
Sbjct: 15 PPPQMLQMHHPLPHHVAVFAHGSSSQNSQAPPLQAASATPP 55
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 570 SLFPAIMTGVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 445
S F G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 570 SLFPAIMTGVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 445
S F G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 534 SPLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL 355
SP + A PV P S ++ PS +P S P S P PTS ++ T YSP
Sbjct: 1597 SPTSPAAGQSPVSPSYSPTS---PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 354 -SY*PAT 337
SY P++
Sbjct: 1652 PSYSPSS 1658
Score = 27.9 bits (59), Expect = 7.0
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 663 PATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMTGVWPSPLA-SIAVIIPVH-PY 490
P+ +PG +P ++ S++ P Y + SP++ S + P + P
Sbjct: 1565 PSYGGMSPGVYSP--SSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPT 1622
Query: 489 ASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
+ S + PS +P S P S P PTS ++ + YSP SY P++
Sbjct: 1623 SPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 492 YASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 361
Y SS T P++ PQ S P PTS ++ + YSP
Sbjct: 1758 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1801
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 534 SPLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL 355
SP + A PV P S ++ PS +P S P S P PTS ++ T YSP
Sbjct: 1604 SPTSPAAGQSPVSPSYSPTS---PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658
Query: 354 -SY*PAT 337
SY P++
Sbjct: 1659 PSYSPSS 1665
Score = 27.9 bits (59), Expect = 7.0
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -1
Query: 663 PATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMTGVWPSPLA-SIAVIIPVH-PY 490
P+ +PG +P ++ S++ P Y + SP++ S + P + P
Sbjct: 1572 PSYGGMSPGVYSP--SSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPT 1629
Query: 489 ASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 337
+ S + PS +P S P S P PTS ++ + YSP SY P++
Sbjct: 1630 SPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1679
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 492 YASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 361
Y SS T P++ PQ S P PTS ++ + YSP
Sbjct: 1765 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1808
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 489 HTDAPEL*PQWKPVDLAKLPSLLLEIRS 572
H P W PV A LPSL EIRS
Sbjct: 123 HLTVPSAISTWFPVQYAVLPSLFFEIRS 150
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 570 SLFPAIMTGVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 445
S F G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1204 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1246
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 570 SLFPAIMTGVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 445
S F G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 570 SLFPAIMTGVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 445
S F G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1327 STFYLTSDGLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 504 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 391
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 504 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 391
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 504 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 391
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 132 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 164
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 482 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 336
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 482 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 336
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -2
Query: 482 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 336
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 1390 FGCTGPITVHCCSGAGRTAVFIA 1412
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 2103 FGCTGPITVHCCSGAGRTAVFIA 2125
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 1139 FGCTGPITVHCCSGAGRTAVFIA 1161
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 1390 FGCTGPITVHCCSGAGRTAVFIA 1412
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 2103 FGCTGPITVHCCSGAGRTAVFIA 2125
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 320 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 481
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 482 ELAYGCTGIMTAMEASGL 535
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 320 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 481
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 482 ELAYGCTGIMTAMEASGL 535
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 320 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 481
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 482 ELAYGCTGIMTAMEASGL 535
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 320 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 481
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 482 ELAYGCTGIMTAMEASGL 535
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 1410 FGCTGPITVHCCSGAGRTAVFIA 1432
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 491 YGCTGIMTAMEASGLGQTPVIIA 559
+GCTG +T SG G+T V IA
Sbjct: 2123 FGCTGPITVHCCSGAGRTAVFIA 2145
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 320 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 481
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 482 ELAYGCTGIMTAMEASGL 535
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +2
Query: 320 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 481
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 482 ELAYGCTGIMTAMEASGL 535
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,688
Number of Sequences: 27780
Number of extensions: 350865
Number of successful extensions: 1013
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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