Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11d18
(682 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 193 4e-48
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 117 3e-25
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 115 1e-24
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 107 2e-22
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 101 2e-20
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 85 2e-15
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 60 4e-08
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 55 2e-06
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 52 2e-05
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 49 1e-04
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 43 0.008
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 41 0.032
UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=... 35 1.6
UniRef50_Q8IL08 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q032B1 Cluster: Dinucleotide-utilizing enzyme for molyb... 34 3.7
UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p... 33 8.5
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 193 bits (470), Expect = 4e-48
Identities = 91/151 (60%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
Frame = +1
Query: 232 KMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLI 411
KMSKMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLI
Sbjct: 57 KMSKMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLI 116
Query: 412 FHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDEL 591
FHLIY+N VN IC +LK E F T V+ SVY+ TR+IL T+P +CSRV+ D++
Sbjct: 117 FHLIYDNRLEVNRICASLKNNENFIDNTYSVVESVYSATRNILSLTDPQAYCSRVANDDV 176
Query: 592 RFFDVTNA-RTHRGGVGDQLFNNYSGFLQNL 681
RFFD ++ G GD +FNN GFL+NL
Sbjct: 177 RFFDANVVDNNYQAGNGDTVFNNMPGFLRNL 207
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKNV 239
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFK
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 240 K 242
K
Sbjct: 60 K 60
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 117 bits (281), Expect = 3e-25
Identities = 63/154 (40%), Positives = 87/154 (56%)
Frame = +1
Query: 220 SNVLKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQA 399
S KM KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ A
Sbjct: 53 STRFKMEKMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLA 112
Query: 400 EQLIFHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVS 579
EQ IFH+IY N+ IC L+ +E F + T +V+ ++ A T +I+ PN +CSR
Sbjct: 113 EQYIFHIIYENDVERERICQMLEISERFENDTYKVVDTINARTSAIMAMVTPNRYCSRPL 172
Query: 580 RDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNL 681
+ R + VT+ VG Q+FN FLQNL
Sbjct: 173 YTDDRIWSVTD----ENNVGGQVFNEMPPFLQNL 202
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKNV 239
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFK
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 240 K 242
K
Sbjct: 60 K 60
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 115 bits (276), Expect = 1e-24
Identities = 60/155 (38%), Positives = 89/155 (57%)
Frame = +1
Query: 217 SSNVLKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQ 396
SS K+ KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM
Sbjct: 52 SSIRFKIEKMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSL 111
Query: 397 AEQLIFHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRV 576
AEQL+ H+IY+N EA +C L++ E F + T R+ ++ T +IL TNP +CS+V
Sbjct: 112 AEQLVTHMIYDNVEAQGAVCKALQHNENFQTETYRLAEDMFNRTSAILAMTNPRRYCSQV 171
Query: 577 SRDELRFFDVTNARTHRGGVGDQLFNNYSGFLQNL 681
+ + R + + V +F + FL+NL
Sbjct: 172 NSNYARIWTTDDV-----NVAGNVFESMPPFLKNL 201
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 233
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFK 57
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 107 bits (258), Expect = 2e-22
Identities = 56/150 (37%), Positives = 83/150 (55%)
Frame = +1
Query: 232 KMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLI 411
+M KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQLI
Sbjct: 56 RMEKMVLPIPDAEGTIYNRSVGKSLISGTESN--RVLIPTKTNYEDVLKLPSMSLPEQLI 113
Query: 412 FHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDEL 591
FH+IY+ + N IC L+Y E F S +V+ VY T +L TNP FC+RV+ +
Sbjct: 114 FHMIYDEPDKQNEICKLLQYNENFHSDLYKVVERVYNKTAEVLAKTNPERFCARVNINNF 173
Query: 592 RFFDVTNARTHRGGVGDQLFNNYSGFLQNL 681
R + + + + +N GFL+NL
Sbjct: 174 RSYGTAD----ETDIANVTYNAMPGFLKNL 199
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/61 (54%), Positives = 37/61 (60%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKNV 239
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 240 K 242
K
Sbjct: 59 K 59
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 101 bits (241), Expect = 2e-20
Identities = 52/123 (42%), Positives = 70/123 (56%)
Frame = +1
Query: 232 KMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLI 411
KM KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI
Sbjct: 57 KMEKMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALI 116
Query: 412 FHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDEL 591
H+IY N E IC+ LK+TE F + V +Y+ T S+L+ NP+ FC+ VS L
Sbjct: 117 IHMIYENLEKQKEICERLKFTEHFADRYKNV-QKLYSNTMSVLNMANPDHFCAEVSLTSL 175
Query: 592 RFF 600
R F
Sbjct: 176 RQF 178
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/65 (46%), Positives = 37/65 (56%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKNV 239
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FK
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 240 KNGFA 254
K A
Sbjct: 60 KMSLA 64
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/127 (35%), Positives = 68/127 (53%)
Frame = +1
Query: 220 SNVLKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQA 399
S K+ K + I D + + + LV + R RILIP+ NYQ V N++ + A
Sbjct: 55 SRFFKIEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPA 114
Query: 400 EQLIFHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVS 579
E+L+ HLIYNN A IC+ L+ E F S V+ +V + I+ T+P FCS V+
Sbjct: 115 ERLVLHLIYNNRTAAAEICNQLRQQENFRSD---VVENVTSMAYRIIQITDPEAFCSVVA 171
Query: 580 RDELRFF 600
+++R F
Sbjct: 172 SNDIRSF 178
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 60 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 233
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 234 NVKNGFA 254
K A
Sbjct: 60 IEKTSIA 66
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 60.5 bits (140), Expect = 4e-08
Identities = 40/150 (26%), Positives = 67/150 (44%)
Frame = +1
Query: 232 KMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLI 411
KM KMV+ I +F M I + L+ +RI+IP +N+ + +M E+ +
Sbjct: 55 KMEKMVVRIGSGVGPEFDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKFV 114
Query: 412 FHLIYNNEEAVNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRDEL 591
F+ IY ++ + +C L E +T + SV + I+ NP +C ++
Sbjct: 115 FYSIYERQDLIAELCRGLVSQEYYTDDVLAKLQSVVS---HIMGLINPAIYCRPEIIRDI 171
Query: 592 RFFDVTNARTHRGGVGDQLFNNYSGFLQNL 681
R FD GV +F+ FL+NL
Sbjct: 172 RSFD----NPPGNGVQTAVFDQMPPFLKNL 197
Score = 40.7 bits (91), Expect = 0.032
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKNVK 242
N CIF + F C Y+ PC Y+DDG FIC HL K FK K
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEK 58
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Frame = +1
Query: 235 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 414
+ KM L I FK+ I + LV ++ + I+IPS NY + +N+M AE+ I
Sbjct: 56 LEKMTLEIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIM 113
Query: 415 HLIYNNEEA-----VNVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVS 579
+ IY + +C++L+ + +T ++ +Y+ I+ NP +C +
Sbjct: 114 YSIYGESATEPTGLITQLCESLRSQDFYTDD---MLSDLYSVVAEIMSKINPAIYCRPIL 170
Query: 580 RDELRFFDVTN 612
+ R F T+
Sbjct: 171 NNSSRSFGKTS 181
Score = 41.1 bits (92), Expect = 0.024
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 81 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRF 230
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYF 54
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Frame = +3
Query: 75 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKN 236
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 237 VKNGF 251
+K+ F
Sbjct: 63 LKSSF 67
Score = 46.8 bits (106), Expect = 5e-04
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Frame = +1
Query: 265 EDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 444
+D+ FKM + + L+ + + + +++ +S E++I + IYN++E +
Sbjct: 73 KDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMIIYTIYNDKEKI 132
Query: 445 NVICDNLKYTEGFTSGTQRVIHSVYATTRSILDTTNPNTFCSRVSRD-ELRFFDVTNART 621
+CD L E F Q + T +I+ NP+ C R++ + E R F N T
Sbjct: 133 KDLCDILMKQEFF---EQPAWAAFQITLNTIMGLVNPSMLCERLTTNKENRVF---NNET 186
Query: 622 HRGGVGDQLFNNYSGFLQNL 681
+ +N +S FL+NL
Sbjct: 187 Y--------YNQFSPFLKNL 198
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/45 (35%), Positives = 33/45 (73%)
Frame = +1
Query: 334 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLK 468
R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC ++K
Sbjct: 104 RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKICQDVK 148
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 105 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKNVKNGF 251
N CIF + F C Y PCS D + DG F+C+ HL + FK K F
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVF 66
Score = 35.9 bits (79), Expect = 0.91
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 232 KMSKMVLPIFDEDDN-QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQL 408
K+ K V I +N FK + L+ RI IP+ NY N+ +M E+
Sbjct: 60 KLKKEVFEIPSGVNNTSFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKY 119
Query: 409 IFHLIYNNEEAV 444
+F+ IY+ + V
Sbjct: 120 VFYSIYDEPDTV 131
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 40.7 bits (91), Expect = 0.032
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 105 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKNVKNGF 251
N CIF + FD C Y CS DA + DG FICN HL K F+ +K+ F
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKF 63
>UniRef50_A1JNI9 Cluster: Cytosine-specific methyltransferase; n=1;
Yersinia enterocolitica subsp. enterocolitica 8081|Rep:
Cytosine-specific methyltransferase - Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
Length = 452
Score = 35.1 bits (77), Expect = 1.6
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Frame = +1
Query: 250 LPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEV----FNLNSMMQAE-QLIF 414
L FD+ + MTIA G++ + IK+ L PS + YQ++ FN N+ + +L
Sbjct: 244 LKAFDDLSSPLAMTIAEDAPGSRFKRIKK-LPPSESKYQKLMRKEFNKNNTTPSGLRLAN 302
Query: 415 HLIY--NNEEAVNVICDNLKYTEGFTSGTQRVIHSVYA-----TTRSILDTTNPNTFCSR 573
H Y N + + V DN + + ++ R I ++YA T ++I+ +PN
Sbjct: 303 HSQYVINKFKKILVDIDNPIFQKEYSLSRGRTIPAIYANKIMNTKKAIMRVLDPNKPSVT 362
Query: 574 VSR--DELRFFDVTNARTHRGGVGDQLFNNYSGF 669
V+ D++ +D T R Q F ++ F
Sbjct: 363 VTTLPDDILHYDEPRILTVRECARLQSFPDWFDF 396
>UniRef50_Q8IL08 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 3001
Score = 35.1 bits (77), Expect = 1.6
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Frame = +1
Query: 217 SSNVLKMSKMVLPIFDEDDNQFKMTIAR--HLVGNKERGIKRILIPSATNYQEVFNLNSM 390
S K S + ++++N F + +L+ N+E+ +K I + T+ + V N+N+
Sbjct: 892 SRRATKNSTLSTNTLNQENNIFSSSYMNKDNLLNNQEKPLKVIFGQNNTSNENVTNVNTT 951
Query: 391 MQAEQL----IFHLIYNNEEAVNVICDNL-KYTEGFTSGTQRVIHSVYATTRSILDTTNP 555
+ + + +F+ NN N++ N+ K G T+ + S+ + SI TT
Sbjct: 952 INSSSVNNTTLFNAPNNNNNNNNILSTNVEKNLFGQTNNLLKGSSSIMFNSASISGTT-- 1009
Query: 556 NTFCSRVSRDELRFFDVTNARTHRGGVGDQLFNNYSGF 669
NT + + + N GG+ LF N + F
Sbjct: 1010 NTINNNIDNNNNNNSSSLN-NNSSGGISGGLFGNKNLF 1046
>UniRef50_Q032B1 Cluster: Dinucleotide-utilizing enzyme for
molybdopterin and thiamine biosynthesis; n=1;
Lactococcus lactis subsp. cremoris SK11|Rep:
Dinucleotide-utilizing enzyme for molybdopterin and
thiamine biosynthesis - Lactococcus lactis subsp.
cremoris (strain SK11)
Length = 317
Score = 33.9 bits (74), Expect = 3.7
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +1
Query: 163 RVRPTRIMTTD-GLSATATSSNVLKMSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRI 339
R+ R+M G TA N++KM + D D + K +A+ + K+ G+K+I
Sbjct: 101 RISNIRVMIWGCGTVGTAIVDNLVKMGVKNFLLIDSDIVEEKNIVAQSIFQKKDIGLKKI 160
Query: 340 LIPSATNYQEVFNL--NSMMQAEQLIFH 417
+ NY E FN+ N++ +++ I H
Sbjct: 161 EV--IKNYVESFNIGKNNVEISDKFINH 186
>UniRef50_Q4V4E3 Cluster: IP10961p; n=4; Sophophora|Rep: IP10961p -
Drosophila melanogaster (Fruit fly)
Length = 407
Score = 32.7 bits (71), Expect = 8.5
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 346 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYTEG 480
PS++ Y + +N+ M+ EQ + NN+ AV + N++++ G
Sbjct: 224 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRG 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,509,571
Number of Sequences: 1657284
Number of extensions: 13132527
Number of successful extensions: 34225
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 32945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34192
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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