Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11d04
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    33   0.26 
Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical pr...    33   0.26 
AF067216-1|AAC17524.1|  301|Caenorhabditis elegans Hypothetical ...    30   1.4  
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    29   3.3  
AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    27   9.9  
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    27   9.9  
AF000299-1|AAC47980.1|  210|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 101 LRHFSICRLKQVILANPTENYTIQ*LPLTTMMQPKDASNFNPNR 232
           LR+F    L++++L +PT+N  I+   L  M Q K+A NF  +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIE--KLVDMRQWKEAKNFESSR 472


>Z81592-4|CAB04728.1|  436|Caenorhabditis elegans Hypothetical
           protein T16G1.4 protein.
          Length = 436

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = +1

Query: 418 DLYMTLSKDLDQNGDRDAY-GDEDD---HKNSWKFMSSWESNRVYFKIFNPKYNQRLKMG 585
           ++Y T   DLD+  + ++Y G E D   H + W     WE N   F +      Q + MG
Sbjct: 248 EIYGTELVDLDKAINLNSYIGIERDVLVHGDLWSANILWEENEGKFLVSKVIDYQLIHMG 307

Query: 586 DPVKDDERKVFSSDDATDSTSQW 654
           +P +D  R +  +    D  + W
Sbjct: 308 NPAEDLVRLLLCTLSGADRQAHW 330


>AF067216-1|AAC17524.1|  301|Caenorhabditis elegans Hypothetical
           protein C35E7.9 protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 379 DDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDHKNSWKFMSSWESNRVYFKIFNP 558
           +DKKD K  +K ++      +D  + GD     ++DD K+  K     E  +   K    
Sbjct: 108 EDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEK 167

Query: 559 KYNQR-LKMGDPVKDDERK 612
           K  ++  K  D  K+DE+K
Sbjct: 168 KEEKKEEKKEDEKKEDEKK 186


>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
            protein Y11D7A.14 protein.
          Length = 1464

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +1

Query: 505  KFMSSWESNRVYFKIFNPKYNQR----LKMGDPVKDDERKV 615
            K M   E N   F +   KYN++    +KM D +++ ERK+
Sbjct: 899  KTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERKI 939


>AC024809-5|AAF59544.3|  287|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.5 protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -3

Query: 198 CIIVVSGNY*IV*FSVGFARITCFNRHIEKCRNYNRQSC*NLQFHLEFSLRFELLHP 28
           C+I ++ +  IV     F    CFNR++ +C    RQ   + Q H++  +   +  P
Sbjct: 122 CLICLASSPIIVTACDHFMHFACFNRYLTECLTGLRQEIQDAQKHMKEQVETNIFCP 178


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
            ZK1067.2 protein.
          Length = 2219

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = -2

Query: 541  NKLCSIPTRT*TSNCSYGRPRRHMRLYHHFGLDPCSESCTDRHAC 407
            +KLC++     ++ C++      ++ +    + PC+E CTD+  C
Sbjct: 1836 SKLCALCVNNCSNKCAHRSCT--LKCFEECNVKPCTEPCTDKLKC 1878


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 109 FFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSE 228
           FFN+++E  DSG+ +    N V   DY   TK  E  Q +
Sbjct: 41  FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQPD 77


>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 304 SYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 447
           +YK+  T H + + S FP  + +++D  +DCKI+    +LY  + KDL
Sbjct: 214 NYKIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 166 NSVIT-ADYDDATKRCEQLQSEPDGSYIIKNTVTELLNNA 282
           N+VI   DY+ A KR +QL  + +G  ++ + + E  NN+
Sbjct: 607 NTVIKLGDYEMARKRYDQLVKDCNGKCVLVDYLPEFYNNS 646


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 304 SYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 447
           +YK+  T H + + S FP  + +++D  +DCKI+    +LY  + KDL
Sbjct: 214 NYKIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 304 SYKLWTTGHQNIVQSCFPLEFRLILDDKKDCKIINKHDDLYMTLSKDL 447
           +YK+  T H + + S FP  + +++D  +DCKI+    +LY  + KDL
Sbjct: 214 NYKIRLT-HMDFI-STFP--YHMVVD--QDCKIVQVGRELYNHIPKDL 255


>AF000299-1|AAC47980.1|  210|Caenorhabditis elegans Hypothetical
           protein E03H12.5 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 23/91 (25%), Positives = 35/91 (38%)
 Frame = +1

Query: 379 DDKKDCKIINKHDDLYMTLSKDLDQNGDRDAYGDEDDHKNSWKFMSSWESNRVYFKIFNP 558
           DDKKD     K D+      KD D+  D +   D+ D K   K     E ++   K    
Sbjct: 104 DDKKDE----KKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKS 159

Query: 559 KYNQRLKMGDPVKDDERKVFSSDDATDSTSQ 651
           K +++ K     +D +      DD  D   +
Sbjct: 160 KKSKKSKREKKDEDKKEDDKKEDDKKDDKKE 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,839,858
Number of Sequences: 27780
Number of extensions: 340068
Number of successful extensions: 1057
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)