Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11d03
         (276 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21 pro...    80   1e-15
CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.                80   1e-15
BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21 p...    80   1e-15
BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.        80   1e-15
AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21 p...    80   1e-15
AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21 p...    80   1e-15
AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21 p...    80   1e-15
AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21 p...    80   1e-15
BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.        73   1e-13
AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21 p...    73   1e-13
X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation f...    69   3e-12
AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21 p...    39   0.002
Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.         28   4.6  
U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.                 28   4.6  
BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3 (Drosoph...    28   4.6  
BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homo...    28   4.6  
AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein.                28   4.6  
AL122074-1|CAB59249.1|  333|Homo sapiens hypothetical protein pr...    28   4.6  
AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Ta...    28   4.6  
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo...    28   4.6  
AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein.       28   4.6  
AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein.                28   4.6  
AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.            28   4.6  

>L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.
          Length = 83

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.
          Length = 81

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21
           protein.
          Length = 90

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGR 45


>BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.
          Length = 66

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21
           protein.
          Length = 66

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 182
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation
           factor protein.
          Length = 97

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 48  MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 158
           MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1   MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37


>AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21
           protein.
          Length = 54

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = +3

Query: 108 NRLIHAKDHASVQLVIADVDPATGR 182
           NR+I AKDHAS+Q+ +A+VD  TGR
Sbjct: 1   NRIIGAKDHASIQMNVAEVDKVTGR 25


>Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.
          Length = 1087

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 123
           +  S  RV++H  C+T  V+    T  G+ RP   +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764


>U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.
          Length = 1087

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 123
           +  S  RV++H  C+T  V+    T  G+ RP   +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764


>BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3
           (Drosophila) protein.
          Length = 1523

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 15  QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 149
           +FR      Y+ +  +  F+DL CP KC     ++   +   V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526


>BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homolog
           (S. cerevisiae) protein.
          Length = 1087

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 123
           +  S  RV++H  C+T  V+    T  G+ RP   +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764


>AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein.
          Length = 1523

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 15  QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 149
           +FR      Y+ +  +  F+DL CP KC     ++   +   V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526


>AL122074-1|CAB59249.1|  333|Homo sapiens hypothetical protein
           protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 15  QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 149
           +FR      Y+ +  +  F+DL CP KC     ++   +   V++
Sbjct: 157 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 201


>AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor
           Tat-CT1 protein.
          Length = 1087

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 123
           +  S  RV++H  C+T  V+    T  G+ RP   +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764


>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
           variant protein.
          Length = 1116

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 123
           +  S  RV++H  C+T  V+    T  G+ RP   +ST
Sbjct: 756 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 793


>AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein.
          Length = 1523

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 15  QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 149
           +FR      Y+ +  +  F+DL CP KC     ++   +   V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526


>AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein.
          Length = 1559

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 15  QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 149
           +FR      Y+ +  +  F+DL CP KC     ++   +   V++
Sbjct: 518 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 562


>AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.
          Length = 1087

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 10  SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 123
           +  S  RV++H  C+T  V+    T  G+ RP   +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,446,205
Number of Sequences: 237096
Number of extensions: 557535
Number of successful extensions: 1231
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)