Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11d01
(678 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase sub... 135 1e-31
U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subu... 135 1e-31
M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein. 135 1e-31
M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subu... 135 1e-31
BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase su... 135 1e-31
BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase su... 135 1e-31
BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase su... 135 1e-31
BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase su... 135 1e-31
AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase su... 135 1e-31
AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase su... 135 1e-31
AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase su... 135 1e-31
BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase su... 125 2e-28
AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase su... 125 2e-28
AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase su... 124 4e-28
BC047869-1|AAH47869.1| 83|Homo sapiens COX4I1 protein protein. 42 0.002
CR457249-1|CAG33530.1| 305|Homo sapiens FBXO34 protein. 32 2.2
BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein. 32 2.2
BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein. 32 2.2
BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein. 32 2.2
AK000732-1|BAA91346.1| 305|Homo sapiens protein ( Homo sapiens ... 32 2.2
>X54802-1|CAA38573.1| 169|Homo sapiens cytochrome-c oxidase
subunit IV protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>U90915-1|AAB51058.1| 169|Homo sapiens cytochrome c oxidase subunit
IV protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>M34600-1|AAA52059.1| 169|Homo sapiens COX4 protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>M21575-1|AAA99312.1| 169|Homo sapiens cytochrome c oxidase subunit
IV precursor protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>BT019825-1|AAV38628.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>BC062437-1|AAH62437.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>BC021236-1|AAH21236.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>BC008704-1|AAH08704.1| 169|Homo sapiens cytochrome c oxidase
subunit IV isoform 1 protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>AF042746-1|AAB97750.1| 144|Homo sapiens cytochrome c oxidase
subunit IV protein.
Length = 144
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 11 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 71 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 130
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 131 LASKWDYEKNEWK 143
>AF017115-1|AAC99578.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>AF005889-2|AAB94819.1| 169|Homo sapiens cytochrome c oxidase
subunit IV precursor protein.
Length = 169
Score = 135 bits (327), Expect = 1e-31
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 1/133 (0%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQA 413
P Y+DR D PLP + + + KAL+EKEK W L+++EK LYR F ++FAE
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 414 PTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDG 593
+ EWK VVG A+ A + M K +VY P+P S +E Q +RMLD+KVNPI G
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 155
Query: 594 LASKWDYENNRWK 632
LASKWDYE N WK
Sbjct: 156 LASKWDYEKNEWK 168
>BC057779-1|AAH57779.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 125 bits (301), Expect = 2e-28
Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 261 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 437
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 438 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYE 617
+G AA + +V+V+ P P +L++ER+ QLQRMLD+KVNP+ GLAS+WDYE
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDYE 165
Query: 618 NNRWK 632
+WK
Sbjct: 166 KKQWK 170
>AL117381-4|CAI23028.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 (lung) protein.
Length = 171
Score = 125 bits (301), Expect = 2e-28
Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = +3
Query: 261 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 437
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 438 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYE 617
+G AA + +V+V+ P P +L++ER+ QLQRMLD+KVNP+ GLAS+WDYE
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDYE 165
Query: 618 NNRWK 632
+WK
Sbjct: 166 KKQWK 170
>AF257180-1|AAK49333.1| 171|Homo sapiens cytochrome c oxidase
subunit IV isoform 2 precursor protein.
Length = 171
Score = 124 bits (298), Expect = 4e-28
Identities = 59/125 (47%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Frame = +3
Query: 261 FPLPAIRF-REDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGV 437
+P+P F E + +AL+EKEKG W +LT EK LYR F +TFAE + EWK V
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 438 VGWALVLSSLAAWIYMAMKVFVYSPIPDSLSEERQKAQLQRMLDLKVNPIDGLASKWDYE 617
+G AA + +V+V+ P P +L++ER+ QLQRMLD+KVNP+ GLAS WDYE
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASHWDYE 165
Query: 618 NNRWK 632
+WK
Sbjct: 166 KKQWK 170
>BC047869-1|AAH47869.1| 83|Homo sapiens COX4I1 protein protein.
Length = 83
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 237 PNYVDRPDFPLPAI-RFREDTPDIKALREKEKGDWRKLTLEEK 362
P Y+DR D PLP + + + KAL+EKEK W L+++EK
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEK 78
>CR457249-1|CAG33530.1| 305|Homo sapiens FBXO34 protein.
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = -1
Query: 432 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGWQAGGS 259
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 210 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGYW---- 259
Query: 258 QACLRSWAGR*NHSLPTHGHQSWQVQCFQWIQPWRRQEHG 139
C RS G L H + W C + + ++ G
Sbjct: 260 MCCHRSQKGFPGCKLGLHDNH-WVPACHSFNRAIHKKAKG 298
>BC109121-1|AAI09122.1| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 31.9 bits (69), Expect = 2.2
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = -1
Query: 432 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGWQAGGS 259
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 616 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGYW---- 665
Query: 258 QACLRSWAGR*NHSLPTHGHQSWQVQCFQWIQPWRRQEHG 139
C RS G L H + W C + + ++ G
Sbjct: 666 MCCHRSQKGFPGCKLGLHDNH-WVPACHSFNRAIHKKAKG 704
>BC109120-1|AAI09121.1| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 31.9 bits (69), Expect = 2.2
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = -1
Query: 432 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGWQAGGS 259
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 616 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGYW---- 665
Query: 258 QACLRSWAGR*NHSLPTHGHQSWQVQCFQWIQPWRRQEHG 139
C RS G L H + W C + + ++ G
Sbjct: 666 MCCHRSQKGFPGCKLGLHDNH-WVPACHSFNRAIHKKAKG 704
>BC095482-1|AAH95482.2| 711|Homo sapiens F-box protein 34 protein.
Length = 711
Score = 31.9 bits (69), Expect = 2.2
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = -1
Query: 432 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGWQAGGS 259
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 616 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGYW---- 665
Query: 258 QACLRSWAGR*NHSLPTHGHQSWQVQCFQWIQPWRRQEHG 139
C RS G L H + W C + + ++ G
Sbjct: 666 MCCHRSQKGFPGCKLGLHDNH-WVPACHSFNRAIHKKAKG 704
>AK000732-1|BAA91346.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ20725 fis, clone HEP13903. ).
Length = 305
Score = 31.9 bits (69), Expect = 2.2
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = -1
Query: 432 PSTLRWGPGTQRRSDRMKLCTEFSFLRG--SICANHPFLFHGEP*CQGCPHGTGWQAGGS 259
P+ RW + R D K C + +++G S+C HP +P CQ P+G G+
Sbjct: 210 PADSRWVRDPRYREDPCKQCKK-KYVKGDVSLCRWHP-----KPYCQALPYGPGYW---- 259
Query: 258 QACLRSWAGR*NHSLPTHGHQSWQVQCFQWIQPWRRQEHG 139
C RS G L H + W C + + ++ G
Sbjct: 260 MCCHRSQKGFPGCKLGLHDNH-WVPACHSFNRAIHKKAKG 298
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,028,505
Number of Sequences: 237096
Number of extensions: 2730597
Number of successful extensions: 7067
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7055
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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