Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11c04
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113387-1|AAM29392.1|  189|Drosophila melanogaster RE06140p pro...   163   2e-40
AY094750-1|AAM11103.1|  189|Drosophila melanogaster GM06185p pro...   163   2e-40
AF199369-1|AAF09579.1|  189|Drosophila melanogaster unknown prot...   163   2e-40
AE014296-1214|AAF50594.1|  189|Drosophila melanogaster CG8612-PA...   163   2e-40

>AY113387-1|AAM29392.1|  189|Drosophila melanogaster RE06140p
           protein.
          Length = 189

 Score =  163 bits (397), Expect = 2e-40
 Identities = 78/155 (50%), Positives = 103/155 (66%)
 Frame = +2

Query: 212 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 391
           S  +A K  P     + A  ES+AA+GFLRP K + PP +  E I  + A+  L  + + 
Sbjct: 21  SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79

Query: 392 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 571
             L  KF  L AC++E  H VPNS +H + TV D+  FY+T V TT PFDALK ++LP+N
Sbjct: 80  GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139

Query: 572 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLK 676
           LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLK 174


>AY094750-1|AAM11103.1|  189|Drosophila melanogaster GM06185p
           protein.
          Length = 189

 Score =  163 bits (397), Expect = 2e-40
 Identities = 78/155 (50%), Positives = 103/155 (66%)
 Frame = +2

Query: 212 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 391
           S  +A K  P     + A  ES+AA+GFLRP K + PP +  E I  + A+  L  + + 
Sbjct: 21  SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79

Query: 392 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 571
             L  KF  L AC++E  H VPNS +H + TV D+  FY+T V TT PFDALK ++LP+N
Sbjct: 80  GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139

Query: 572 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLK 676
           LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLK 174


>AF199369-1|AAF09579.1|  189|Drosophila melanogaster unknown
           protein.
          Length = 189

 Score =  163 bits (397), Expect = 2e-40
 Identities = 78/155 (50%), Positives = 103/155 (66%)
 Frame = +2

Query: 212 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 391
           S  +A K  P     + A  ES+AA+GFLRP K + PP +  E I  + A+  L  + + 
Sbjct: 21  SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79

Query: 392 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 571
             L  KF  L AC++E  H VPNS +H + TV D+  FY+T V TT PFDALK ++LP+N
Sbjct: 80  GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139

Query: 572 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLK 676
           LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLK 174


>AE014296-1214|AAF50594.1|  189|Drosophila melanogaster CG8612-PA
           protein.
          Length = 189

 Score =  163 bits (397), Expect = 2e-40
 Identities = 78/155 (50%), Positives = 103/155 (66%)
 Frame = +2

Query: 212 SIRQAQKKYPKADKKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEF 391
           S  +A K  P     + A  ES+AA+GFLRP K + PP +  E I  + A+  L  + + 
Sbjct: 21  SAAKAAKAKPVKTSTISAVGESIAAKGFLRPHKPYSPPADAAERIRTVAASLQLKSD-QL 79

Query: 392 EALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPFDALKLMDLPKN 571
             L  KF  L AC++E  H VPNS +H + TV D+  FY+T V TT PFDALK ++LP+N
Sbjct: 80  GNLSEKFEFLNACFQELQHGVPNSQVHELRTVSDVIAFYQTAVDTTVPFDALKRIELPEN 139

Query: 572 LHVQKDYVRFHPDTDTLFNGVSAFPKSSTIVTGLK 676
           LH+Q +YVRFHP+TDT F+G +AFPKSST+VTGLK
Sbjct: 140 LHIQYEYVRFHPETDTKFDGKTAFPKSSTLVTGLK 174


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,058,762
Number of Sequences: 53049
Number of extensions: 650076
Number of successful extensions: 1723
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)