Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11c03
         (666 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   2.8  
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2...    31   3.7  
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.     31   3.7  
AF226050-1|AAF86950.1|  319|Homo sapiens HCDI protein.                 30   8.5  

>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 26/90 (28%), Positives = 41/90 (45%)
 Frame = +2

Query: 212  SVDTVTATKLSTGWTRTK*EASTLTLIQSSRCTSRSKPPATDI*CSLKSLILASVIQFTK 391
            S+DT +A+  + G +      S  +   SS   S  K P   +  S K+ I AS  Q T 
Sbjct: 2900 SLDTKSASLPTPGQSLNTIPDSDASTASSSLSKSPEKNPRARMMTSTKA-ISASSFQSTG 2958

Query: 392  LWSAVEGTSSPNYAATCDAMPRAPSPHPKY 481
                 EG++SP+ A     +P + +  P+Y
Sbjct: 2959 FTETPEGSASPSMAGHEPRVPTSGTGDPRY 2988


>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
            alpha-2-macroglobulin domain containing 8 protein.
          Length = 1885

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +1

Query: 286  PHSVFEMHIAIQAASNGHIVLSEIPNPGVSDPVYEIVVGGGGNKFTELRRNLRRNAKSSV 465
            P  +    +A++A ++  + LS  P       + EIV+GG  N  + +  +      +S 
Sbjct: 967  PLRLTRFDVAVRAHNDARVALSSGPQDTAG--MIEIVLGGHQNTRSWISTSKMGEPVASA 1024

Query: 466  TTPQILSPIELRGFYIKISEDGLVEFG 546
             T +ILS  E R F+I     GL++ G
Sbjct: 1025 HTAKILSWDEFRTFWIS-WRGGLIQVG 1050


>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
          Length = 1884

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +1

Query: 286  PHSVFEMHIAIQAASNGHIVLSEIPNPGVSDPVYEIVVGGGGNKFTELRRNLRRNAKSSV 465
            P  +    +A++A ++  + LS  P       + EIV+GG  N  + +  +      +S 
Sbjct: 966  PLRLTRFDVAVRAHNDARVALSSGPQDTAG--MIEIVLGGHQNTRSWISTSKMGEPVASA 1023

Query: 466  TTPQILSPIELRGFYIKISEDGLVEFG 546
             T +ILS  E R F+I     GL++ G
Sbjct: 1024 HTAKILSWDEFRTFWIS-WRGGLIQVG 1049


>AF226050-1|AAF86950.1|  319|Homo sapiens HCDI protein.
          Length = 319

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 402 RWREQVHRTTPQPATQCQ 455
           RWR+++H  +P PA +CQ
Sbjct: 32  RWRDRLHWDSPNPAAECQ 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,850,918
Number of Sequences: 237096
Number of extensions: 1905963
Number of successful extensions: 3927
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3921
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)