Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11b24
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066649-1|AAH66649.1| 327|Homo sapiens chromosome 1 open readi... 51 3e-06
AL118511-1|CAC13161.1| 327|Homo sapiens novel protein protein. 51 3e-06
AK027431-1|BAB55105.1| 327|Homo sapiens protein ( Homo sapiens ... 51 3e-06
BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein. 33 0.93
AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein. 33 0.93
AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens ... 33 0.93
AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein. 33 0.93
U50062-1|AAC32232.1| 671|Homo sapiens RIP protein kinase protein. 31 3.7
BC126256-1|AAI26257.1| 671|Homo sapiens receptor (TNFRSF)-inter... 31 3.7
BC126254-1|AAI26255.1| 671|Homo sapiens receptor (TNFRSF)-inter... 31 3.7
AY682848-1|AAT74626.1| 671|Homo sapiens receptor (TNFRSF)-inter... 31 3.7
AL031963-3|CAD70625.1| 671|Homo sapiens receptor (TNFRSF)-inter... 31 3.7
AB208926-1|BAD92163.1| 519|Homo sapiens receptor (TNFRSF)-inter... 31 3.7
AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding ... 31 4.9
AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associate... 31 4.9
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 30 6.5
BC104632-1|AAI04633.1| 432|Homo sapiens ARID4B protein protein. 30 6.5
BC062536-1|AAH62536.1| 428|Homo sapiens ARID4B protein protein. 30 6.5
BC048959-1|AAH48959.1| 569|Homo sapiens ARID4B protein protein. 30 6.5
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 30 6.5
AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive dom... 30 6.5
AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive dom... 30 6.5
AL391994-4|CAI13749.1| 483|Homo sapiens AT rich interactive dom... 30 6.5
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 30 6.5
AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive dom... 30 6.5
AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive dom... 30 6.5
AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive dom... 30 6.5
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 30 6.5
AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive dom... 30 6.5
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 30 6.5
>BC066649-1|AAH66649.1| 327|Homo sapiens chromosome 1 open reading
frame 198 protein.
Length = 327
Score = 51.2 bits (117), Expect = 3e-06
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +3
Query: 207 YFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNF 386
YF +++P+A KI +D + + Y W L ++ E+++ L+ P
Sbjct: 32 YFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRD------- 84
Query: 387 DLNALPAEKNDLMSFFGREH--GQKLIQ--DENSSYRDEHSAPFLYQTKSQLDLCV 542
P + +L F G GQK+++ DE+ +++DEHSAPF ++TKSQ++ +
Sbjct: 85 -----PGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSI 135
>AL118511-1|CAC13161.1| 327|Homo sapiens novel protein protein.
Length = 327
Score = 51.2 bits (117), Expect = 3e-06
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +3
Query: 207 YFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNF 386
YF +++P+A KI +D + + Y W L ++ E+++ L+ P
Sbjct: 32 YFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRD------- 84
Query: 387 DLNALPAEKNDLMSFFGREH--GQKLIQ--DENSSYRDEHSAPFLYQTKSQLDLCV 542
P + +L F G GQK+++ DE+ +++DEHSAPF ++TKSQ++ +
Sbjct: 85 -----PGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSI 135
>AK027431-1|BAB55105.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ14525 fis, clone NT2RM1001105. ).
Length = 327
Score = 51.2 bits (117), Expect = 3e-06
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +3
Query: 207 YFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNF 386
YF +++P+A KI +D + + Y W L ++ E+++ L+ P
Sbjct: 32 YFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRD------- 84
Query: 387 DLNALPAEKNDLMSFFGREH--GQKLIQ--DENSSYRDEHSAPFLYQTKSQLDLCV 542
P + +L F G GQK+++ DE+ +++DEHSAPF ++TKSQ++ +
Sbjct: 85 -----PGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSI 135
>BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein.
Length = 1726
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 261 AKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLD----TFNFDLNALPAEKNDLMS 428
A LYE I + L KE+ + + +K + L L+ T +LN + E+ND
Sbjct: 821 ADTLYEKIREQLRRKEE-QYRKEVEVKQQLELSLQTLEMELRTVKSNLNQVVQERNDAQR 879
Query: 429 FFGREHGQKLIQD 467
RE +++QD
Sbjct: 880 QLSREQNARMLQD 892
>AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein.
Length = 1710
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 261 AKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLD----TFNFDLNALPAEKNDLMS 428
A LYE I + L KE+ + + +K + L L+ T +LN + E+ND
Sbjct: 805 ADTLYEKIREQLRRKEE-QYRKEVEVKQQLELSLQTLEMELRTVKSNLNQVVQERNDAQR 863
Query: 429 FFGREHGQKLIQD 467
RE +++QD
Sbjct: 864 QLSREQNARMLQD 876
>AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens
cDNA FLJ46736 fis, clone TRACH3020769, weakly similar
to Myosin heavy chain, nonmuscle type B. ).
Length = 1080
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 261 AKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLD----TFNFDLNALPAEKNDLMS 428
A LYE I + L KE+ + + +K + L L+ T +LN + E+ND
Sbjct: 362 ADTLYEKIREQLRRKEE-QYRKEVEVKQQLELSLQTLEMELRTVKSNLNQVVQERNDAQR 420
Query: 429 FFGREHGQKLIQD 467
RE +++QD
Sbjct: 421 QLSREQNARMLQD 433
>AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein.
Length = 1715
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 261 AKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLD----TFNFDLNALPAEKNDLMS 428
A LYE I + L KE+ + + +K + L L+ T +LN + E+ND
Sbjct: 810 ADTLYEKIREQLRRKEE-QYRKEVEVKQQLELSLQTLEMELRTVKSNLNQVVQERNDAQR 868
Query: 429 FFGREHGQKLIQD 467
RE +++QD
Sbjct: 869 QLSREQNARMLQD 881
>U50062-1|AAC32232.1| 671|Homo sapiens RIP protein kinase protein.
Length = 671
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 IWDSLTEKEKVEL--LNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSF 431
+W L +E EL ++ T K TL Y + N D+NA P EK+D+ SF
Sbjct: 164 MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN-DVNAKPTEKSDVYSF 214
>BC126256-1|AAI26257.1| 671|Homo sapiens receptor
(TNFRSF)-interacting serine-threonine kinase 1 protein.
Length = 671
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 IWDSLTEKEKVEL--LNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSF 431
+W L +E EL ++ T K TL Y + N D+NA P EK+D+ SF
Sbjct: 164 MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN-DVNAKPTEKSDVYSF 214
>BC126254-1|AAI26255.1| 671|Homo sapiens receptor
(TNFRSF)-interacting serine-threonine kinase 1 protein.
Length = 671
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 IWDSLTEKEKVEL--LNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSF 431
+W L +E EL ++ T K TL Y + N D+NA P EK+D+ SF
Sbjct: 164 MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN-DVNAKPTEKSDVYSF 214
>AY682848-1|AAT74626.1| 671|Homo sapiens receptor
(TNFRSF)-interacting serine-threonine kinase 1 protein.
Length = 671
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 IWDSLTEKEKVEL--LNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSF 431
+W L +E EL ++ T K TL Y + N D+NA P EK+D+ SF
Sbjct: 164 MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN-DVNAKPTEKSDVYSF 214
>AL031963-3|CAD70625.1| 671|Homo sapiens receptor
(TNFRSF)-interacting serine-threonine kinase 1 protein.
Length = 671
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 IWDSLTEKEKVEL--LNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSF 431
+W L +E EL ++ T K TL Y + N D+NA P EK+D+ SF
Sbjct: 164 MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN-DVNAKPTEKSDVYSF 214
>AB208926-1|BAD92163.1| 519|Homo sapiens receptor
(TNFRSF)-interacting serine-threonine kinase 1 variant
protein.
Length = 519
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 IWDSLTEKEKVEL--LNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSF 431
+W L +E EL ++ T K TL Y + N D+NA P EK+D+ SF
Sbjct: 12 MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN-DVNAKPTEKSDVYSF 62
>AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding
protein 1-like 1 protein.
Length = 1226
Score = 30.7 bits (66), Expect = 4.9
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKQPVLGYRNLNLFKL 343
>AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associated
antigen BRCAA1 protein.
Length = 1213
Score = 30.7 bits (66), Expect = 4.9
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKQPVLGYRNLNLFKL 343
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>BC104632-1|AAI04633.1| 432|Homo sapiens ARID4B protein protein.
Length = 432
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>BC062536-1|AAH62536.1| 428|Homo sapiens ARID4B protein protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>BC048959-1|AAH48959.1| 569|Homo sapiens ARID4B protein protein.
Length = 569
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AL391994-4|CAI13749.1| 483|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 483
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 205 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 264
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 265 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 322
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 323 TPINKRPVLGYRNLNLFKL 341
>AL391994-1|CAI13746.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 12 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 71
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 72 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 129
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 130 TPINKRPVLGYRNLNLFKL 148
>AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 207 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 266
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 267 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 324
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 325 TPINKRPVLGYRNLNLFKL 343
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 205 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 264
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 265 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 322
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 323 TPINKRPVLGYRNLNLFKL 341
>AL133418-1|CAI22958.1| 927|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 927
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 12 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 71
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 72 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 129
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 130 TPINKRPVLGYRNLNLFKL 148
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 30.3 bits (65), Expect = 6.5
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Frame = +3
Query: 240 IHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLN-ALPAE-- 410
+ +D I ++ + + S+ K+ E+ +DT KPD LK + F + +PA
Sbjct: 220 VKKDNILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWK 279
Query: 411 ---KNDLMSFFGREHGQ----KLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKE 569
K D S E + + +++NSS +E PF + ++ L L + +
Sbjct: 280 TELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQ--QLYKFMEDRG 337
Query: 570 KPTSPPPVMSELELSHSKV 626
P + PV+ L+ K+
Sbjct: 338 TPINKRPVLGYRNLNLFKL 356
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,486,219
Number of Sequences: 237096
Number of extensions: 1469905
Number of successful extensions: 3129
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3129
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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