Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11b24
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121666-1|AAM51993.1| 1561|Drosophila melanogaster RE10888p pro...    32   0.82 
AF387518-1|AAL01872.1| 1564|Drosophila melanogaster Rho-GTPase a...    32   0.82 
AE014298-2594|AAN09591.1| 1561|Drosophila melanogaster CG32555-P...    32   0.82 
AE014298-2593|AAF48748.2| 1561|Drosophila melanogaster CG32555-P...    32   0.82 
AE014298-2592|AAF48749.2| 1561|Drosophila melanogaster CG32555-P...    32   0.82 
X62948-1|CAA44720.1|  267|Drosophila melanogaster Cyclin C protein.    31   1.4  
AY061425-1|AAL28973.1|  267|Drosophila melanogaster LD35705p pro...    31   1.4  
AE014297-1914|AAF55109.1|  267|Drosophila melanogaster CG7281-PA...    31   1.4  
AF183182-1|AAG43431.1| 2210|Drosophila melanogaster filamin isof...    31   1.9  
BT024206-1|ABC86268.1| 1396|Drosophila melanogaster RE44980p pro...    29   4.4  
AY094964-1|AAM11317.1| 1396|Drosophila melanogaster SD05640p pro...    29   4.4  
AF188360-1|AAF04108.1| 2210|Drosophila melanogaster filamin A pr...    29   4.4  
AF174492-1|AAF25614.1| 2343|Drosophila melanogaster filamin1 pro...    29   4.4  
AE014297-2314|AAF55390.4| 2210|Drosophila melanogaster CG3937-PA...    29   4.4  
AE014297-2313|AAS65162.1| 2540|Drosophila melanogaster CG3937-PD...    29   4.4  
AE013599-3539|AAF46953.3|  367|Drosophila melanogaster CG30189-P...    29   4.4  

>AY121666-1|AAM51993.1| 1561|Drosophila melanogaster RE10888p
           protein.
          Length = 1561

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 333 LIKPDITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQDENSSYRDEHSAPFLY 512
           LI+  IT  Y +L +    + +   E N+ ++ FG E GQKL +      RD+H    L+
Sbjct: 273 LIRNQIT-DYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLH 331

Query: 513 Q 515
           Q
Sbjct: 332 Q 332


>AF387518-1|AAL01872.1| 1564|Drosophila melanogaster Rho-GTPase
           activating protein p190 protein.
          Length = 1564

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 333 LIKPDITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQDENSSYRDEHSAPFLY 512
           LI+  IT  Y +L +    + +   E N+ ++ FG E GQKL +      RD+H    L+
Sbjct: 273 LIRNQIT-DYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLH 331

Query: 513 Q 515
           Q
Sbjct: 332 Q 332


>AE014298-2594|AAN09591.1| 1561|Drosophila melanogaster CG32555-PC,
           isoform C protein.
          Length = 1561

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 333 LIKPDITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQDENSSYRDEHSAPFLY 512
           LI+  IT  Y +L +    + +   E N+ ++ FG E GQKL +      RD+H    L+
Sbjct: 273 LIRNQIT-DYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLH 331

Query: 513 Q 515
           Q
Sbjct: 332 Q 332


>AE014298-2593|AAF48748.2| 1561|Drosophila melanogaster CG32555-PB,
           isoform B protein.
          Length = 1561

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 333 LIKPDITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQDENSSYRDEHSAPFLY 512
           LI+  IT  Y +L +    + +   E N+ ++ FG E GQKL +      RD+H    L+
Sbjct: 273 LIRNQIT-DYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLH 331

Query: 513 Q 515
           Q
Sbjct: 332 Q 332


>AE014298-2592|AAF48749.2| 1561|Drosophila melanogaster CG32555-PA,
           isoform A protein.
          Length = 1561

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 333 LIKPDITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQDENSSYRDEHSAPFLY 512
           LI+  IT  Y +L +    + +   E N+ ++ FG E GQKL +      RD+H    L+
Sbjct: 273 LIRNQIT-DYHVLWSQGSKMLSQYREWNEFLNIFGHEAGQKLFRRHMKKLRDDHLNKKLH 331

Query: 513 Q 515
           Q
Sbjct: 332 Q 332


>X62948-1|CAA44720.1|  267|Drosophila melanogaster Cyclin C protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 195 AAEDYFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKP 344
           A + +F  +N    K+ E +    NLYE +W    EK+++++L   + KP
Sbjct: 213 ATKQWFAELNVDLDKVQEIVRAIVNLYE-LWKDWKEKDEIQMLLSKIPKP 261


>AY061425-1|AAL28973.1|  267|Drosophila melanogaster LD35705p
           protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 195 AAEDYFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKP 344
           A + +F  +N    K+ E +    NLYE +W    EK+++++L   + KP
Sbjct: 213 ATKQWFAELNVDLDKVQEIVRAIVNLYE-LWKDWKEKDEIQMLLSKIPKP 261


>AE014297-1914|AAF55109.1|  267|Drosophila melanogaster CG7281-PA
           protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 195 AAEDYFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKP 344
           A + +F  +N    K+ E +    NLYE +W    EK+++++L   + KP
Sbjct: 213 ATKQWFAELNVDLDKVQEIVRAIVNLYE-LWKDWKEKDEIQMLLSKIPKP 261


>AF183182-1|AAG43431.1| 2210|Drosophila melanogaster filamin isoform A
            protein.
          Length = 2210

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294  LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
            +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 1260 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 1319

Query: 468  ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
             +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 1320 SHSEYIEEHTTKVVQQT-TQSELVTGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 1378


>BT024206-1|ABC86268.1| 1396|Drosophila melanogaster RE44980p
           protein.
          Length = 1396

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294 LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
           +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 446 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 505

Query: 468 ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
            +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 506 SHSEYIEEHTTKVVQQT-TQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 564


>AY094964-1|AAM11317.1| 1396|Drosophila melanogaster SD05640p
           protein.
          Length = 1396

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294 LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
           +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 446 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 505

Query: 468 ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
            +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 506 SHSEYIEEHTTKVVQQT-TQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 564


>AF188360-1|AAF04108.1| 2210|Drosophila melanogaster filamin A
            protein.
          Length = 2210

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294  LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
            +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 1260 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 1319

Query: 468  ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
             +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 1320 SHSEYIEEHTTKVVQQT-TQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 1378


>AF174492-1|AAF25614.1| 2343|Drosophila melanogaster filamin1 protein.
          Length = 2343

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294  LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
            +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 1393 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 1452

Query: 468  ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
             +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 1453 SHSEYIEEHTTKVVQQT-TQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 1511


>AE014297-2314|AAF55390.4| 2210|Drosophila melanogaster CG3937-PA,
            isoform A protein.
          Length = 2210

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294  LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
            +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 1260 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 1319

Query: 468  ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
             +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 1320 SHSEYIEEHTTKVVQQT-TQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 1378


>AE014297-2313|AAS65162.1| 2540|Drosophila melanogaster CG3937-PD,
            isoform D protein.
          Length = 2540

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
 Frame = +3

Query: 294  LTEKEKVELLNDTLIKPD--ITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQD 467
            +T K   E+++  +I+ D    + Y+L D  ++D+N     K+     F  +  + + Q 
Sbjct: 1590 ITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQY 1649

Query: 468  ENSSYRDEHSAPFLYQTKSQLDLCVLSS---YR-VPKEK---PTSPPPVMSELELSHSKV 626
             +S Y +EH+   + QT +Q +L    S   YR V  EK   PT+   V +E+ +   KV
Sbjct: 1650 SHSEYIEEHTTKVVQQT-TQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGKV 1708


>AE013599-3539|AAF46953.3|  367|Drosophila melanogaster CG30189-PA
           protein.
          Length = 367

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 474 SSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKEK 572
           SS  +E S+  +Y++ ++LDL V   YRV K K
Sbjct: 309 SSMSNELSSYLIYESSTRLDLLVCGLYRVNKRK 341


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,887,279
Number of Sequences: 53049
Number of extensions: 457093
Number of successful extensions: 1271
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)