Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11b22
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.96
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 31 0.96
U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical pr... 30 1.7
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.7
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 29 2.2
EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short i... 29 2.2
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 29 2.2
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 29 2.2
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 29 2.2
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 29 2.2
AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhes... 29 2.2
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 29 2.2
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 29 3.9
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 29 3.9
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical p... 28 5.1
Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 28 6.8
U97592-4|AAB52872.1| 450|Caenorhabditis elegans Hypothetical pr... 28 6.8
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 9.0
U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine rece... 27 9.0
U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.7 bits (66), Expect = 0.96
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 423 KQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKD 575
+ QEE ++ ++K+ + N +AV +K ELFK+ ++R+ +KD
Sbjct: 363 EHQEEPDEDTMSKVKVLYIR--NIKEAVTEEKLNELFKEYASLDRVKKVKD 411
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 604 TCKSLASICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVTNCL 443
TC+ L SIC+ + M S+ L S ++ A S S + I +V CL
Sbjct: 139 TCQLLVSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHISFCILILIVATCL 192
>U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical
protein F07C4.6 protein.
Length = 204
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 106 TCGFPC-SSTYLSVNVSWPNLNCPILT*AILI 14
TCG C +STY N +P LNC +T A+ +
Sbjct: 104 TCGLCCQTSTYSCQNAPFPRLNCASVTKAMCL 135
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = +3
Query: 420 IKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDL 599
++ + ++ ++L K +E L+A +AQ EEL ++Q E I DKQ +A+ +
Sbjct: 1703 LELENDELEELRAKGGGISSEEKRRLEAKIAQLEEELEEEQSNCELAI---DKQRKAQ-V 1758
Query: 600 QVTRVMTDLNRMYTGFQET 656
Q+ ++ TDL+ T Q+T
Sbjct: 1759 QLEQITTDLSMERTLNQKT 1777
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 153 CKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 275
C D +V+ KY + +GARL S P+ + +GD + +
Sbjct: 396 CADPCQSYVEVKYLSQKTSTGARLCCSLPSVIRSEGDDVII 436
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 153 CKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 275
C D +V+ KY + +GARL S P+ + +GD + +
Sbjct: 396 CADPCQSYVEVKYLSQKTSTGARLCCSLPSVIRSEGDDVII 436
>EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short
isoform protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 179 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 69
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 179 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 69
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 153 CKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 275
C D +V+ KY + +GARL S P+ + +GD + +
Sbjct: 396 CADPCQSYVEVKYLSQKTSTGARLCCSLPSVIRSEGDDVII 436
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 179 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 69
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +3
Query: 459 KLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNR 632
K +A++ L + + + K++ F+ERI+ + E D + R +T + R
Sbjct: 41 KKVASYETDLKKLSTEMQRLRRDAEKRETFLERIVTAQYHPTELNDTNLARTLTSIKR 98
>AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform b protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 179 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 69
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 179 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 69
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -3
Query: 103 CGFPC-SSTYLSVNVSWPNLNCPILT 29
CG C +S+Y NV++P LNC +T
Sbjct: 105 CGLCCQTSSYSCPNVAFPRLNCATIT 130
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 180 PRVCLQRLYNFHILNCW 130
PR+C +LYN IL CW
Sbjct: 722 PRMCPSKLYNEQILPCW 738
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 180 PRVCLQRLYNFHILNCW 130
PR+C +LYN IL CW
Sbjct: 752 PRMCPSKLYNEQILPCW 768
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 532 KSSSVFCATTACSAFVCSVNVAISLVTNCLFFSSCCLIAGSYLPVHST 389
K +S C T S F C+ + L FS+CC I G + HST
Sbjct: 19 KDASFECVTLLKSVF-CARKKKKRFFLSFLSFSTCCSILGWFFLSHST 65
>Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical
protein C36B1.6 protein.
Length = 175
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Frame = -3
Query: 607 VTCKSLASICLSLIAMMR---SINSCFLKSSSVFCATTAC------SAFV-CSVNVAISL 458
+ C S+ S+ L++ M+ +I C L S+ F C ++F+ C+ +
Sbjct: 77 IDCCSIFSVLLNIARMVMFGGTILGCVLVIST-FSRNNECDQLLYWTSFIFCAFFIIFYS 135
Query: 457 VTNCLFFSSCCLI-AGSYLPV 398
+T C+F CC I G+Y V
Sbjct: 136 ITTCIFICCCCCIFTGAYRSV 156
>Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical
protein T21B4.7 protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 538 FLKSSSVFCATTACSAFVCSVNVAISLVTNC--LFFSSCCL 422
FL+ S VF T ++ S I L T LFFSSCC+
Sbjct: 188 FLEPSVVFTPGTFWDTYLTSSFKLILLATGLQVLFFSSCCI 228
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 480 EHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQ 602
E +Q + +K E++ K E ++ ++ +DK+ + +DLQ
Sbjct: 260 EEIQKMQKALKEKDEQISKLTEQLQGLLINRDKETKVEDLQ 300
>U97592-4|AAB52872.1| 450|Caenorhabditis elegans Hypothetical
protein C14A11.5 protein.
Length = 450
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +3
Query: 144 YGNCKDAVSRHVDKKYKYTYSESGARLPPSAP-NSVAKQGDPLYLQPHTVLITKSGVIQL 320
YGNCK+++ V++KY + + L +S + + + + + + + K+ +++
Sbjct: 322 YGNCKESIRSRVEEKYNQLFIDRIRELTEKLEWSSESPEKNRQFTKTDELTVVKAHIVRK 381
Query: 321 I---MKSKLPYA---IELQEWLLEEVIPQV 392
+ KS P A E+ + L E+ P +
Sbjct: 382 LDYWKKSTQPQAAHYTEMYQLLFEKCGPSI 411
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +3
Query: 426 QQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQV 605
++ + N LV +L A + ++ ++ K E + ++ E +E+ I +DK + ++
Sbjct: 168 KEAQNNSDLVLELKAALQQEKSSSHGML-NKIEIMRQRCEDLEKSILDRDKSEDENIMER 226
Query: 606 TRVMTDLNRMY 638
+RV +LN ++
Sbjct: 227 SRVEKELNALH 237
>Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical
protein F36G9.7 protein.
Length = 280
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 151 FPYFKLLAMSLATNLTCGFPCSSTYLSVNVSW 56
FPY++ L TNLTC +S ++ VNVS+
Sbjct: 241 FPYYEYLCTHYWTNLTC---YTSIFVFVNVSF 269
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 27.5 bits (58), Expect = 9.0
Identities = 25/102 (24%), Positives = 40/102 (39%)
Frame = +3
Query: 225 PPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTG 404
PP N AKQ D T +T + + LI++ +L++ + + I +L +G
Sbjct: 2589 PPVTANFSAKQFDNELKNAITQAVTNNEHVVLILEDH-----QLRKNIFLQAINSLLASG 2643
Query: 405 KYDPAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEEL 530
QQE + A T ALQ +A + L
Sbjct: 2644 NVPGLFTQQELDGLVALVSEAANQASFTGALQQFLAHRIRSL 2685
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 147 GNCKDAVSRHVDKKYKYTYSESGARLPPSAPNS-VAKQGDPLYLQPHTVLITKSGVIQLI 323
G C + K K+ S A++ P AP S A + L L P + +GV+ L+
Sbjct: 292 GGCACVNCNCITDKTKFFVIPSLAKVTPPAPTSPTAVHHETLILSPLQIFFIFTGVVSLL 351
Query: 324 M 326
+
Sbjct: 352 L 352
>U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine
receptor, class r protein9 protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 538 FLKSSSVFCA--TTACSAFVCSVNVAISLVT 452
FLK S + C+ T CS F C V V I ++T
Sbjct: 27 FLKVSLLDCSAKTKCCSIFTCLVGVIIVIIT 57
>U28971-5|AAA68379.1| 982|Caenorhabditis elegans Hypothetical
protein B0244.6 protein.
Length = 982
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 529 SSSVFCATTACSAFVCSVNVAISLVTNCLF-FSSCCLIAGSYL 404
+SS+ C TAC+ + +N +L+ C++ S L+ GS +
Sbjct: 186 TSSMSCTDTACAPLITLINCNNTLLIICIYQIVSVVLVFGSLI 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,821,562
Number of Sequences: 27780
Number of extensions: 312848
Number of successful extensions: 1078
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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