Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11b13
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 142 1e-33
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 142 1e-33
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 52 3e-06
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 52 3e-06
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 52 3e-06
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 49 1e-05
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 49 1e-05
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 49 1e-05
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 49 1e-05
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 49 1e-05
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 48 2e-05
Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein. 30 9.1
BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein. 30 9.1
BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein. 30 9.1
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 142 bits (343), Expect = 1e-33
Identities = 62/103 (60%), Positives = 77/103 (74%)
Frame = +1
Query: 385 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 564
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 13 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 72
Query: 565 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDI 693
YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+I
Sbjct: 73 EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEI 115
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 142 bits (343), Expect = 1e-33
Identities = 62/103 (60%), Positives = 77/103 (74%)
Frame = +1
Query: 385 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 564
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 43 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 102
Query: 565 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDI 693
YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+I
Sbjct: 103 EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEI 145
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +1
Query: 385 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 564
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-VKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 565 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH 675
++ E FK+V + +GWY TG + DIA++
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAIN 109
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +1
Query: 385 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 564
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 565 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH 675
++ E FK+V + +GWY TG + DIA++
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAIN 109
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +1
Query: 385 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 564
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 565 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH 675
++ E FK+V + +GWY TG + DIA++
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAIN 109
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/136 (25%), Positives = 56/136 (41%)
Frame = +1
Query: 268 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 447
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 448 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 627
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 628 WYTTGDAPSERDIAVH 675
WY TG +E + +H
Sbjct: 172 WYATGHDITEHSVLIH 187
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/136 (25%), Positives = 56/136 (41%)
Frame = +1
Query: 268 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 447
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 448 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 627
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 628 WYTTGDAPSERDIAVH 675
WY TG +E + +H
Sbjct: 172 WYATGHDITEHSVLIH 187
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/136 (25%), Positives = 56/136 (41%)
Frame = +1
Query: 268 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 447
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 448 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 627
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 628 WYTTGDAPSERDIAVH 675
WY TG +E + +H
Sbjct: 172 WYATGHDITEHSVLIH 187
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/136 (25%), Positives = 56/136 (41%)
Frame = +1
Query: 268 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 447
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 448 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 627
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 628 WYTTGDAPSERDIAVH 675
WY TG +E + +H
Sbjct: 172 WYATGHDITEHSVLIH 187
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/136 (25%), Positives = 56/136 (41%)
Frame = +1
Query: 268 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 447
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 57 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 105
Query: 448 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 627
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 106 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 164
Query: 628 WYTTGDAPSERDIAVH 675
WY TG +E + +H
Sbjct: 165 WYATGHDITEHSVLIH 180
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 48.4 bits (110), Expect = 2e-05
Identities = 35/136 (25%), Positives = 58/136 (42%)
Frame = +1
Query: 268 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 447
AS+ P++ P PT P P PG LHP+++ + + + R +G
Sbjct: 54 ASAQAPVQTPAPTLPGPALPG---------PFPGGRVVRLHPVLLASTVDSYER--RNKG 102
Query: 448 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 627
+ V+G L+G ++EV N F + ++ NM E K+V + LG
Sbjct: 103 AAR-VIGTLLGTVNKHSVEVTNCFSVSYNESDEVVVDMEFAKNM-YELHKKVSPNELILG 160
Query: 628 WYTTGDAPSERDIAVH 675
WY G +E + +H
Sbjct: 161 WYAAGHDITEHSVLIH 176
>Y19188-1|CAB60727.1| 759|Homo sapiens aczonin protein.
Length = 759
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 262 ESASSGPPIEVPNPTSPAPTTPGSNK 339
+ S+ PP + P P P+P PGS K
Sbjct: 413 QPGSTKPPPQQPGPAKPSPQQPGSTK 438
>BC125271-1|AAI25272.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 262 ESASSGPPIEVPNPTSPAPTTPGSNK 339
+ S+ PP + P P P+P PGS K
Sbjct: 483 QPGSTKPPPQQPGPAKPSPQQPGSTK 508
>BC122565-1|AAI22566.1| 641|Homo sapiens PCLO protein protein.
Length = 641
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 262 ESASSGPPIEVPNPTSPAPTTPGSNK 339
+ S+ PP + P P P+P PGS K
Sbjct: 483 QPGSTKPPPQQPGPAKPSPQQPGSTK 508
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,148,322
Number of Sequences: 237096
Number of extensions: 1666417
Number of successful extensions: 5583
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5552
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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