Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11b05
(733 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p pro... 75 1e-13
AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA... 75 1e-13
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 33 0.30
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro... 30 2.8
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ... 30 2.8
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB... 30 2.8
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA... 30 2.8
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 29 6.5
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 29 6.5
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 29 6.5
>AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p
protein.
Length = 176
Score = 74.9 bits (176), Expect = 1e-13
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 137 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMH 313
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK KRK + R SRT+ +
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHRSSRTKQLS 60
Query: 314 KNLKAKE 334
K + KE
Sbjct: 61 KRMSQKE 67
>AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA
protein.
Length = 176
Score = 74.9 bits (176), Expect = 1e-13
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 137 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMH 313
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK KRK + R SRT+ +
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRKYVHRSSRTKQLS 60
Query: 314 KNLKAKE 334
K + KE
Sbjct: 61 KRMSQKE 67
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 33.5 bits (73), Expect = 0.30
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 206 PQGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQCSN 352
P +RC+KCL FGH + CK + + S T+ + K E C N
Sbjct: 183 PLPLRCKKCLRFGHPTPICKSV-ETCINCSETKHTNDGEKCTNEKNCLN 230
>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
protein.
Length = 1823
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 262 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 381
Q Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 723 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 762
>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
protein encore protein.
Length = 1548
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 262 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 381
Q Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 574 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 613
>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
isoform B protein.
Length = 1818
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 262 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 381
Q Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 718 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 757
>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
isoform A protein.
Length = 1823
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 262 QGQTQDPSSSFTYTNHA*ESESQRRRSMQQWQLQDTQQEK 381
Q Q Q SSS Y N+ S Q+++S QQ Q Q Q++
Sbjct: 723 QSQNQGNSSSGGYNNYRKSSPHQQQQSQQQQQSQQHHQQQ 762
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 215 IRCQKCLEFGHWSYECKGKRKILV--RPSRTRIMHKNLKAKEEGQCSN 352
++C C E+GH C K +V P T KN K +CSN
Sbjct: 382 VQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSN 429
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 215 IRCQKCLEFGHWSYECKGKRKILV--RPSRTRIMHKNLKAKEEGQCSN 352
++C C E+GH C K +V P T KN K +CSN
Sbjct: 226 VQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSN 273
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 215 IRCQKCLEFGHWSYECK 265
IRC +CLEFGH + CK
Sbjct: 407 IRCFRCLEFGHRAPYCK 423
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,434,562
Number of Sequences: 53049
Number of extensions: 471818
Number of successful extensions: 1790
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -