Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11b03
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.7  
AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione S-tran...    23   9.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 557 AKDWLKIWLRKGF*QQKNKIF 619
           +++W  +W+R GF  +K + F
Sbjct: 52  SREWKALWIRDGFFDEKQREF 72


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 557 AKDWLKIWLRKGF*QQKNKIF 619
           +++W  +W+R GF   K + F
Sbjct: 52  SREWKALWIRDGFFDGKQREF 72


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +1

Query: 472 PETVQSWIEYLSGETWNPMKLKYQLKNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPLT 651
           P  VQ+ +  L   T++  K+   L+++ E+   N+V+ GV  +E    + +D+   P  
Sbjct: 160 PYDVQTCVLKLGSWTYDGFKV--DLRHMDEKSGSNIVDVGVDLSEFYMSVEWDILEVPAV 217

Query: 652 DN 657
            N
Sbjct: 218 RN 219


>AF513637-1|AAM53609.1|  214|Anopheles gambiae glutathione
           S-transferase D11 protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 496 QSSFVLFLEGQYLSYVSVYAIYWSTDFTITFLDNKPF 386
           Q+ + + +EG+ L+   V  +  + +F  +FLD  PF
Sbjct: 110 QAFYPVMMEGKELNPELVVKLDEALEFLESFLDKTPF 146


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,318
Number of Sequences: 2352
Number of extensions: 10073
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)