Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11a18
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C5K0 Cluster: SJCHGC08845 protein; n=1; Schistosoma j...    36   1.3  
UniRef50_A5VAJ6 Cluster: Putative uncharacterized protein; n=1; ...    34   4.1  
UniRef50_Q5EVJ8 Cluster: Homeodomain protein Pax6; n=2; Oikopleu...    33   7.1  
UniRef50_Q4TB44 Cluster: Chromosome undetermined SCAF7204, whole...    33   9.4  
UniRef50_Q4T6J6 Cluster: Chromosome undetermined SCAF8730, whole...    33   9.4  
UniRef50_Q1JSJ6 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  
UniRef50_Q1E748 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  
UniRef50_A4R2W5 Cluster: Predicted protein; n=1; Magnaporthe gri...    33   9.4  

>UniRef50_Q5C5K0 Cluster: SJCHGC08845 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08845 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 262

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
 Frame = -3

Query: 541 QHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE----IYALVFKH-S 377
           + +   F+ TH+P  ++     +R   PE R        R +W+RE    I  L +++  
Sbjct: 29  EELEREFEHTHYPDVFSREKLSSRILLPEPRIQVWFSNRRAKWRREEKMRIKQLTYRNQQ 88

Query: 376 GTWNFTTRIGLWLRPLIPSTVLSRRIASNPSIQKKSFNNVC 254
            + +        + PLIP+T+ S  +   P+  K SFN  C
Sbjct: 89  KSIHHQYHSNTKVTPLIPTTITS--LTVTPTSMKSSFNTTC 127


>UniRef50_A5VAJ6 Cluster: Putative uncharacterized protein; n=1;
           Sphingomonas wittichii RW1|Rep: Putative uncharacterized
           protein - Sphingomonas wittichii RW1
          Length = 176

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = -1

Query: 507 TRLVMQGAYT----RPEGVAPRPDLRPREGP-RGPDGNGK 403
           TRL  +G YT    +  GVAPRP  RP  GP RGP G G+
Sbjct: 114 TRLQSEG-YTVLNPKVAGVAPRPQPRPTGGPGRGPGGGGR 152


>UniRef50_Q5EVJ8 Cluster: Homeodomain protein Pax6; n=2; Oikopleura
           dioica|Rep: Homeodomain protein Pax6 - Oikopleura dioica
           (Tunicate)
          Length = 414

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
           Q   + +   F+ TH+P  +A      + G PEAR        R +W+RE
Sbjct: 243 QQQIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSNRRAKWRRE 292


>UniRef50_Q4TB44 Cluster: Chromosome undetermined SCAF7204, whole
           genome shotgun sequence; n=4; Euteleostomi|Rep:
           Chromosome undetermined SCAF7204, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 818

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -2

Query: 485 LTPGQRGLPRGPICALVRGREDPMATGNLRLGL 387
           L PG++GLP+GP+ AL +  E P   G  RL L
Sbjct: 729 LGPGRQGLPQGPVAAL-QEEEPPAGGGRARLPL 760


>UniRef50_Q4T6J6 Cluster: Chromosome undetermined SCAF8730, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF8730,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 927

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -2

Query: 539 AHKRLIPANSSPVSLC------RELTPGQRGLPRGPICALVRGREDPMATGNLRL 393
           A +R  PA+ SP  +C      R LTP +RG   G +     GR  P   G+LR+
Sbjct: 540 AGRRAWPASPSPTGVCGRAVAARYLTPARRGRRLGHLAEYFLGRPRPSRCGSLRV 594


>UniRef50_Q1JSJ6 Cluster: Putative uncharacterized protein; n=1;
           Toxoplasma gondii|Rep: Putative uncharacterized protein
           - Toxoplasma gondii
          Length = 1682

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -1

Query: 489 GAYTRPEGVAPRPDLRPREGPRGPDGNGKFTP-WSLSIVERGTSQLGSV 346
           GA+T   GV P P   P  GP GP+  G F P W +          GSV
Sbjct: 673 GAHTPHPGVGPGPVPGPVPGPVGPETPGAFGPVWGVPFAPAAYPAPGSV 721


>UniRef50_Q1E748 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 312

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 480 TRPEGVAPRPDLRPREGPRGPDGNGKFTPWSLSIVERGT 364
           ++P+  +P+P + P   PRGPDG+G   P      ERG+
Sbjct: 273 SQPQSQSPQPQM-PIRSPRGPDGSG---PGGFGFAERGS 307


>UniRef50_A4R2W5 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 168

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -1

Query: 495 MQGAYTRPEGVAPRPDLRPREGPRGPDGNGKFTPWSLSIVERGTSQ 358
           ++GA    E   P  +  P +GP GP G     PW +   +R ++Q
Sbjct: 102 VEGATAGAEVAGPASENMPADGPHGPPGRPYGQPWYVDYYDRKSNQ 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,764,076
Number of Sequences: 1657284
Number of extensions: 11565766
Number of successful extensions: 28673
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28645
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)