Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11a18
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068992-1|AAH68992.1| 474|Homo sapiens ATG4 autophagy related ... 32 2.4
AK223383-1|BAD97103.1| 474|Homo sapiens APG4 autophagy 4 homolo... 32 2.4
AJ312332-1|CAC85951.1| 474|Homo sapiens APG4-D protein protein. 32 2.4
U08895-1|AAA81637.1| 387|Homo sapiens adhalin protein. 31 3.1
L34355-1|AAA35510.1| 387|Homo sapiens 50 kD dystrophin-associat... 31 3.1
BC025702-1|AAH25702.1| 387|Homo sapiens sarcoglycan, alpha (50k... 31 3.1
Z95332-5|CAG38363.1| 436|Homo sapiens paired box gene 6 (anirid... 31 4.1
Z95332-4|CAG38362.1| 422|Homo sapiens paired box gene 6 (anirid... 31 4.1
Z83307-5|CAG38087.1| 436|Homo sapiens paired box gene 6 (anirid... 31 4.1
Z83307-4|CAG38086.1| 422|Homo sapiens paired box gene 6 (anirid... 31 4.1
M93650-1|AAA36416.1| 422|Homo sapiens paired-box protein protein. 31 4.1
M77844-2|AAA59963.1| 422|Homo sapiens oculorhombin protein. 31 4.1
M77844-1|AAA59962.1| 422|Homo sapiens oculorhombin protein. 31 4.1
BC011953-1|AAH11953.1| 422|Homo sapiens paired box gene 6 (anir... 31 4.1
AY707088-1|AAU12168.1| 422|Homo sapiens paired box gene 6 isofo... 31 4.1
AY047583-1|AAK95849.1| 422|Homo sapiens paired box protein PAX6... 31 4.1
AB209177-1|BAD92414.1| 385|Homo sapiens paired box gene 6 isofo... 31 4.1
BX088650-10|CAM26301.1| 181|Homo sapiens PHD finger protein 1 p... 30 7.3
BX088650-9|CAM26300.1| 242|Homo sapiens PHD finger protein 1 pr... 30 7.3
BX088650-8|CAM26299.1| 567|Homo sapiens PHD finger protein 1 pr... 30 7.3
BC008834-1|AAH08834.1| 567|Homo sapiens PHD finger protein 1 pr... 30 7.3
AL662799-11|CAM25570.1| 181|Homo sapiens PHD finger protein 1 p... 30 7.3
AL662799-10|CAM25569.1| 242|Homo sapiens PHD finger protein 1 p... 30 7.3
AL662799-9|CAI18272.1| 567|Homo sapiens PHD finger protein 1 pr... 30 7.3
AL050332-3|CAC38366.1| 567|Homo sapiens PHD finger protein 1 pr... 30 7.3
AL021366-5|CAA16159.1| 567|Homo sapiens cICK0721Q.4.2 (PHD fing... 30 7.3
AF052205-1|AAC13273.1| 567|Homo sapiens PHD finger protein 2 pr... 30 7.3
>BC068992-1|AAH68992.1| 474|Homo sapiens ATG4 autophagy related 4
homolog D (S. cerevisiae) protein.
Length = 474
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 474 PEGVAPRPDLRPREGPRGPDGNG 406
PE RP+ R GPRGPD NG
Sbjct: 16 PEDARRRPEARRPRGPRGPDPNG 38
>AK223383-1|BAD97103.1| 474|Homo sapiens APG4 autophagy 4 homolog D
variant protein.
Length = 474
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 474 PEGVAPRPDLRPREGPRGPDGNG 406
PE RP+ R GPRGPD NG
Sbjct: 16 PEDARRRPEARRPRGPRGPDPNG 38
>AJ312332-1|CAC85951.1| 474|Homo sapiens APG4-D protein protein.
Length = 474
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 474 PEGVAPRPDLRPREGPRGPDGNG 406
PE RP+ R GPRGPD NG
Sbjct: 16 PEDARRRPEARRPRGPRGPDPNG 38
>U08895-1|AAA81637.1| 387|Homo sapiens adhalin protein.
Length = 387
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 279 WIEGLLAIRRLKTVEGIKGLNQRPIRVVKFHVPLCLKTKA*ISRCHRVLAAPHEGANRAS 458
W G L + + + G PI K V + + + + S C +++A+P A A
Sbjct: 165 WEPGELQLLNVTSALDRGGRVPLPIEGRKEGVYIKVGSASPFSTCLKMVASPDSHARCAQ 224
Query: 459 GQPPLAGC 482
GQPPL C
Sbjct: 225 GQPPLLSC 232
>L34355-1|AAA35510.1| 387|Homo sapiens 50 kD dystrophin-associated
glycoprotein precursor protein.
Length = 387
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 279 WIEGLLAIRRLKTVEGIKGLNQRPIRVVKFHVPLCLKTKA*ISRCHRVLAAPHEGANRAS 458
W G L + + + G PI K V + + + + S C +++A+P A A
Sbjct: 165 WEPGELQLLNVTSALDRGGRVPLPIEGRKEGVYIKVGSASPFSTCLKMVASPDSHARCAQ 224
Query: 459 GQPPLAGC 482
GQPPL C
Sbjct: 225 GQPPLLSC 232
>BC025702-1|AAH25702.1| 387|Homo sapiens sarcoglycan, alpha (50kDa
dystrophin-associated glycoprotein) protein.
Length = 387
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 279 WIEGLLAIRRLKTVEGIKGLNQRPIRVVKFHVPLCLKTKA*ISRCHRVLAAPHEGANRAS 458
W G L + + + G PI K V + + + + S C +++A+P A A
Sbjct: 165 WEPGELQLLNVTSALDRGGRVPLPIEGRKEGVYIKVGSASPFSTCLKMVASPDSHARCAQ 224
Query: 459 GQPPLAGC 482
GQPPL C
Sbjct: 225 GQPPLLSC 232
>Z95332-5|CAG38363.1| 436|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 436
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 233 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 282
>Z95332-4|CAG38362.1| 422|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>Z83307-5|CAG38087.1| 436|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 436
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 233 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 282
>Z83307-4|CAG38086.1| 422|Homo sapiens paired box gene 6 (aniridia,
keratitis) protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>M93650-1|AAA36416.1| 422|Homo sapiens paired-box protein protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>M77844-2|AAA59963.1| 422|Homo sapiens oculorhombin protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>M77844-1|AAA59962.1| 422|Homo sapiens oculorhombin protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>BC011953-1|AAH11953.1| 422|Homo sapiens paired box gene 6
(aniridia, keratitis) protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>AY707088-1|AAU12168.1| 422|Homo sapiens paired box gene 6 isoform
a protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>AY047583-1|AAK95849.1| 422|Homo sapiens paired box protein PAX6
protein.
Length = 422
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 219 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 268
>AB209177-1|BAD92414.1| 385|Homo sapiens paired box gene 6 isoform
a variant protein.
Length = 385
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 553 QNSFQHIRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
Q + + F+ TH+P +A A+ PEAR R +W+RE
Sbjct: 182 QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 231
>BX088650-10|CAM26301.1| 181|Homo sapiens PHD finger protein 1
protein.
Length = 181
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 121 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 156
>BX088650-9|CAM26300.1| 242|Homo sapiens PHD finger protein 1
protein.
Length = 242
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 197 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 232
>BX088650-8|CAM26299.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 507 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 542
>BC008834-1|AAH08834.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 507 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 542
>AL662799-11|CAM25570.1| 181|Homo sapiens PHD finger protein 1
protein.
Length = 181
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 121 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 156
>AL662799-10|CAM25569.1| 242|Homo sapiens PHD finger protein 1
protein.
Length = 242
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 197 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 232
>AL662799-9|CAI18272.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 507 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 542
>AL050332-3|CAC38366.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 507 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 542
>AL021366-5|CAA16159.1| 567|Homo sapiens cICK0721Q.4.2 (PHD finger
protein 2 (variant 2)) protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 507 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 542
>AF052205-1|AAC13273.1| 567|Homo sapiens PHD finger protein 2
protein.
Length = 567
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 524 IPANSSPVS-LCRELTPGQRGLPRGPICALVRGREDPM 414
+P S+P S LCR L+PG G RG + L RG DP+
Sbjct: 507 LPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRG--DPV 542
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,042,261
Number of Sequences: 237096
Number of extensions: 1699137
Number of successful extensions: 15709
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15696
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -