Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11a18
(720 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071145-1|AAL48767.1| 520|Drosophila melanogaster RE18068p pro... 31 2.1
AE014297-1231|AAF54580.2| 520|Drosophila melanogaster CG4674-PA... 31 2.1
X79493-1|CAA56038.1| 838|Drosophila melanogaster transcription ... 30 2.8
BT011390-1|AAR96182.1| 624|Drosophila melanogaster GH01157p pro... 30 2.8
AE014135-133|AAN06513.1| 624|Drosophila melanogaster CG1464-PB,... 30 2.8
AE014135-132|AAX52513.1| 857|Drosophila melanogaster CG1464-PC,... 30 2.8
AE014135-131|AAF59318.1| 838|Drosophila melanogaster CG1464-PA,... 30 2.8
AE014135-130|AAX52512.1| 898|Drosophila melanogaster CG1464-PD,... 30 2.8
X76208-2|CAA53801.1| 504|Drosophila melanogaster protein 34-spe... 30 3.6
K02620-1|AAA28967.1| 510|Drosophila melanogaster protein ( D.me... 30 3.6
BT029125-1|ABJ17058.1| 501|Drosophila melanogaster IP16008p pro... 30 3.6
AE014297-1996|AAN13647.2| 501|Drosophila melanogaster CG4898-PF... 30 3.6
AY051487-1|AAK92911.1| 543|Drosophila melanogaster GH14454p pro... 29 4.8
AF134350-1|AAD31712.1| 543|Drosophila melanogaster transcriptio... 29 4.8
AE014135-161|AAF59395.4| 543|Drosophila melanogaster CG11186-PA... 29 4.8
>AY071145-1|AAL48767.1| 520|Drosophila melanogaster RE18068p
protein.
Length = 520
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 504 RLVMQGAYTRPEGVAPRPDLRPREGPRGPD-GNGKFTPWSLSIVERGTSQLGSVS 343
++ Q R + P P RP +GP GP+ G+G +L + S +GS S
Sbjct: 302 KVYSQDPSNRQSSLRPPPPPRPNDGPPGPELGSGNLFEPALPVYPSLDSSIGSPS 356
>AE014297-1231|AAF54580.2| 520|Drosophila melanogaster CG4674-PA
protein.
Length = 520
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 504 RLVMQGAYTRPEGVAPRPDLRPREGPRGPD-GNGKFTPWSLSIVERGTSQLGSVS 343
++ Q R + P P RP +GP GP+ G+G +L + S +GS S
Sbjct: 302 KVYSQDPSNRQSSLRPPPPPRPNDGPPGPELGSGNLFEPALPVYPSLDSSIGSPS 356
>X79493-1|CAA56038.1| 838|Drosophila melanogaster transcription
factor protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 426 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE 469
>BT011390-1|AAR96182.1| 624|Drosophila melanogaster GH01157p
protein.
Length = 624
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 212 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE 255
>AE014135-133|AAN06513.1| 624|Drosophila melanogaster CG1464-PB,
isoform B protein.
Length = 624
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 212 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE 255
>AE014135-132|AAX52513.1| 857|Drosophila melanogaster CG1464-PC,
isoform C protein.
Length = 857
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 445 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE 488
>AE014135-131|AAF59318.1| 838|Drosophila melanogaster CG1464-PA,
isoform A protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 426 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE 469
>AE014135-130|AAX52512.1| 898|Drosophila melanogaster CG1464-PD,
isoform D protein.
Length = 898
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 486 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRRE 529
>X76208-2|CAA53801.1| 504|Drosophila melanogaster protein
34-specific exons protein.
Length = 504
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 426 AAPHEGANRASGQPPLAGCKLPA*RDG 506
AAP EGA A G PP G PA +G
Sbjct: 426 AAPAEGAPAAEGAPPAEGAPAPAPAEG 452
>K02620-1|AAA28967.1| 510|Drosophila melanogaster protein (
D.melanogaster tropomyosingene isoform 33 (9B0, exon
10B. ).
Length = 510
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 426 AAPHEGANRASGQPPLAGCKLPA*RDG 506
AAP EGA A G PP G PA +G
Sbjct: 435 AAPAEGAPAAEGAPPAEGAPAPAPAEG 461
>BT029125-1|ABJ17058.1| 501|Drosophila melanogaster IP16008p
protein.
Length = 501
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 426 AAPHEGANRASGQPPLAGCKLPA*RDG 506
AAP EGA A G PP G PA +G
Sbjct: 426 AAPAEGAPAAEGAPPAEGAPAPAPAEG 452
>AE014297-1996|AAN13647.2| 501|Drosophila melanogaster CG4898-PF,
isoform F protein.
Length = 501
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 426 AAPHEGANRASGQPPLAGCKLPA*RDG 506
AAP EGA A G PP G PA +G
Sbjct: 426 AAPAEGAPAAEGAPPAEGAPAPAPAEG 452
>AY051487-1|AAK92911.1| 543|Drosophila melanogaster GH14454p
protein.
Length = 543
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 280 LEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRRE 323
>AF134350-1|AAD31712.1| 543|Drosophila melanogaster transcription
factor Toy protein.
Length = 543
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 280 LEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRRE 323
>AE014135-161|AAF59395.4| 543|Drosophila melanogaster CG11186-PA
protein.
Length = 543
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 535 IRDSFQLTHHPSRYAGSLHPARGGCPEARFAPS*GAARTRWQRE 404
+ F+ TH+P +A + G PEAR R +W+RE
Sbjct: 280 LEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRRE 323
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,797,751
Number of Sequences: 53049
Number of extensions: 507978
Number of successful extensions: 932
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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