Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11a14
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 1.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 1.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 1.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 1.8
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 23 1.8
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 2.4
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 23 2.4
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 2.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.3
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 7.3
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 9.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 9.7
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 9.7
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.7
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 9.7
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 378
N N K+L +N NY E +P I +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPIPVPVYYG 124
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 378
N N K+L +N NY E +P + +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 124
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 378
N N K+L +N NY E +P + +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 124
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 378
N N K+L +N NY E +P + +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 124
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 378
N N K+L +N NY E +P + +PV YG
Sbjct: 326 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 357
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 23.4 bits (48), Expect = 1.8
Identities = 19/67 (28%), Positives = 27/67 (40%)
Frame = +1
Query: 145 LQMTPMLIKKMVVASQDAMPFRQKGTHYLNTPTGFETIFNTIKALMNEKNKKRLYVHNQN 324
L T L+K +V DA PFRQ + P G + +A NKKR
Sbjct: 90 LVRTKTLVKNAIVTI-DATPFRQWYEGHYVLPLGRKRGAKLTEAEEEVLNKKRSKKAEAK 148
Query: 325 YEEMYKY 345
Y+ ++
Sbjct: 149 YKARQRF 155
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 364 PVEYGGNGG--SIEEIIDYWRKKVKEYSDWLEED 459
P+ + G G S+EEI+D +KK + D +D
Sbjct: 111 PMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKD 144
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 364 PVEYGGNGG--SIEEIIDYWRKKVKEYSDWLEED 459
P+ + G G S+EEI+D +KK + D +D
Sbjct: 111 PMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKD 144
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.0 bits (47), Expect = 2.4
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 364 PVEYGGNGG--SIEEIIDYWRKKVKEYSDWLEED 459
P+ + G G S+EEI+D +KK + D +D
Sbjct: 111 PMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKD 144
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 506 VFGFPGRL 483
+FGFPGRL
Sbjct: 597 IFGFPGRL 604
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 506 VFGFPGRL 483
+FGFPGRL
Sbjct: 597 IFGFPGRL 604
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 73 EDDNAIVAGIFFVADLD 123
++DN V GI+F+A+ D
Sbjct: 85 KNDNEEVCGIYFLAEPD 101
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 81 VVFHHDN 61
VVFHHDN
Sbjct: 118 VVFHHDN 124
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 456 FFQPVTIFLDFFPPVIYNF 400
+ P T F F PP +Y F
Sbjct: 369 YIGPPTPFPRFIPPNVYRF 387
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 81 VVFHHDN 61
VVFHHDN
Sbjct: 240 VVFHHDN 246
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 403 IIDYWRKKVKEYSDWLEE 456
IID +K++K DW E
Sbjct: 370 IIDLRKKQLKSLEDWENE 387
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.0 bits (42), Expect = 9.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 573 QVQNLIEFKLPEGTLDAEHILSGLRFPWSLGLV 475
Q+Q +FK P A I GL F G+V
Sbjct: 75 QIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIV 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,741
Number of Sequences: 438
Number of extensions: 4802
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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