Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11a11
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02308-1|CAA26178.1| 313|Homo sapiens protein ( Human mRNA for ... 232 8e-61
D00596-1|BAA00472.1| 313|Homo sapiens thymidylate synthase prot... 232 8e-61
BT006811-1|AAP35457.1| 313|Homo sapiens thymidylate synthetase ... 232 8e-61
BC083512-1|AAH83512.1| 313|Homo sapiens TYMS protein protein. 232 8e-61
BC013919-1|AAH13919.1| 313|Homo sapiens thymidylate synthetase ... 232 8e-61
BC002567-1|AAH02567.1| 313|Homo sapiens thymidylate synthetase ... 232 8e-61
AK223372-1|BAD97092.1| 313|Homo sapiens thymidylate synthetase ... 232 8e-61
AB062290-1|BAB93473.1| 313|Homo sapiens thymidylate synthetase ... 232 8e-61
AB077208-1|BAB83677.1| 279|Homo sapiens thymidylate synthase pr... 179 7e-45
AB077207-1|BAB83676.1| 230|Homo sapiens thymidylate synthase pr... 60 1e-08
D00517-1|BAA00404.1| 68|Homo sapiens thymidylate synthase prot... 49 1e-05
D21852-1|BAA04878.2| 974|Homo sapiens KIAA0029 protein. 32 2.2
BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1... 32 2.2
AC016742-1|AAY14728.1| 784|Homo sapiens unknown protein. 32 2.2
BC051828-1|AAH51828.1| 812|Homo sapiens cyclic AMP-regulated ph... 31 2.9
BC036399-1|AAH36399.1| 793|Homo sapiens ARPP-21 protein protein. 31 2.9
>X02308-1|CAA26178.1| 313|Homo sapiens protein ( Human mRNA for
thymidylate synthase (EC 2.1.1.45). ).
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>D00596-1|BAA00472.1| 313|Homo sapiens thymidylate synthase
protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>BT006811-1|AAP35457.1| 313|Homo sapiens thymidylate synthetase
protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>BC083512-1|AAH83512.1| 313|Homo sapiens TYMS protein protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>BC013919-1|AAH13919.1| 313|Homo sapiens thymidylate synthetase
protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>BC002567-1|AAH02567.1| 313|Homo sapiens thymidylate synthetase
protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>AK223372-1|BAD97092.1| 313|Homo sapiens thymidylate synthetase
variant protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>AB062290-1|BAB93473.1| 313|Homo sapiens thymidylate synthetase
protein.
Length = 313
Score = 232 bits (568), Expect = 8e-61
Identities = 104/157 (66%), Positives = 128/157 (81%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
D ++DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 147 RDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 183
>AB077208-1|BAB83677.1| 279|Homo sapiens thymidylate synthase
protein.
Length = 279
Score = 179 bits (436), Expect = 7e-45
Identities = 82/126 (65%), Positives = 100/126 (79%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHNNTLPLLTTKRVFTRGVIE 390
H E QYL I I++ G ++ DRTG GTLS+FG RYSL + PLLTTKRVF +GV+E
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDE-FPLLTTKRVFWKGVLE 86
Query: 391 ELLWMISGSTDSKALAAKGVHIWDANGSRNFLDNLGFTDREEGDLGPVYGFQWRHSGAKY 570
ELLW I GST++K L++KGV IWDANGSR+FLD+LGF+ REEGDLGPVYGFQWRH GA+Y
Sbjct: 87 ELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEY 146
Query: 571 IDCQTD 588
D ++D
Sbjct: 147 RDMESD 152
>AB077207-1|BAB83676.1| 230|Homo sapiens thymidylate synthase
protein.
Length = 230
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = +1
Query: 586 DYTGQGIDQLQSVIDSIKNNPADRRMLICAWN 681
DY+GQG+DQLQ VID+IK NP DRR+++CAWN
Sbjct: 69 DYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWN 100
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSLHN 336
H E QYL I I++ G ++ DRTG GTLS+FG RYSL +
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRD 69
>D00517-1|BAA00404.1| 68|Homo sapiens thymidylate synthase
protein.
Length = 68
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +1
Query: 211 HDEYQYLKLIDQIIKSGDKRVDRTGVGTLSIFGAMQRYSL 330
H E QYL I I++ G ++ DRTG GTLS+FG RYSL
Sbjct: 28 HGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSL 67
>D21852-1|BAA04878.2| 974|Homo sapiens KIAA0029 protein.
Length = 974
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 574 DCQTDYTGQ-GIDQLQSVIDSIKNNPADRRMLI 669
D +YT GID + +++++KNNP DR ML+
Sbjct: 99 DSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLL 131
>BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1
protein.
Length = 1099
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 574 DCQTDYTGQ-GIDQLQSVIDSIKNNPADRRMLI 669
D +YT GID + +++++KNNP DR ML+
Sbjct: 140 DSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLL 172
>AC016742-1|AAY14728.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 574 DCQTDYTGQ-GIDQLQSVIDSIKNNPADRRMLI 669
D +YT GID + +++++KNNP DR ML+
Sbjct: 140 DSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLL 172
>BC051828-1|AAH51828.1| 812|Homo sapiens cyclic AMP-regulated
phosphoprotein, 21 kD protein.
Length = 812
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 574 DCQTDYTGQ-GIDQLQSVIDSIKNNPADRRMLI 669
DC +YT GID + +I+++KNN DR +L+
Sbjct: 136 DCSQEYTDSTGIDLHEFLINTLKNNSRDRMILL 168
>BC036399-1|AAH36399.1| 793|Homo sapiens ARPP-21 protein protein.
Length = 793
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 574 DCQTDYTGQ-GIDQLQSVIDSIKNNPADRRMLI 669
DC +YT GID + +I+++KNN DR +L+
Sbjct: 136 DCSQEYTDSTGIDLHEFLINTLKNNSRDRMILL 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,165,273
Number of Sequences: 237096
Number of extensions: 1846156
Number of successful extensions: 2897
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2888
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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