Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11a06
         (376 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028781-1|ABI34162.1|  105|Drosophila melanogaster IP05502p pro...   136   1e-32
AE014134-3052|AAF53770.1|  105|Drosophila melanogaster CG10685-P...   136   1e-32
AE014134-2838|AAF53606.1|  117|Drosophila melanogaster CG6840-PA...    44   6e-05
BT001454-1|AAN71209.1|  136|Drosophila melanogaster GM15177p pro...    31   0.64 
BT011368-1|AAR96160.1|  943|Drosophila melanogaster RE64037p pro...    27   5.9  
AY058743-1|AAL13972.1|  769|Drosophila melanogaster LP08544p pro...    27   5.9  
AE013599-148|AAM68345.1|  878|Drosophila melanogaster CG7843-PB,...    27   5.9  
AE013599-147|AAM68344.1|  943|Drosophila melanogaster CG7843-PD,...    27   5.9  
AE013599-146|AAM68343.1|  943|Drosophila melanogaster CG7843-PC,...    27   5.9  
AE013599-145|AAF57281.2|  943|Drosophila melanogaster CG7843-PA,...    27   5.9  

>BT028781-1|ABI34162.1|  105|Drosophila melanogaster IP05502p
           protein.
          Length = 105

 Score =  136 bits (328), Expect = 1e-32
 Identities = 57/96 (59%), Positives = 76/96 (79%)
 Frame = +2

Query: 65  ISELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 244
           ++EL GD+ +G   RT+VF NE HTLGN+LK II +Y +V+FCGYT+PHP E K+HFRIQ
Sbjct: 4   LAELAGDEKNGEGSRTFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQ 63

Query: 245 ARETPALEVLKRGLKDLEMVCDHTINLFDKEVKRFN 352
           +R   A+++LKRGL+DLE +CDHTI  F+KE+  FN
Sbjct: 64  SRRDRAIDILKRGLEDLEGLCDHTIVTFEKEMAEFN 99


>AE014134-3052|AAF53770.1|  105|Drosophila melanogaster CG10685-PA
           protein.
          Length = 105

 Score =  136 bits (328), Expect = 1e-32
 Identities = 57/96 (59%), Positives = 76/96 (79%)
 Frame = +2

Query: 65  ISELPGDDDSGPTCRTYVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 244
           ++EL GD+ +G   RT+VF NE HTLGN+LK II +Y +V+FCGYT+PHP E K+HFRIQ
Sbjct: 4   LAELAGDEKNGEGSRTFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQ 63

Query: 245 ARETPALEVLKRGLKDLEMVCDHTINLFDKEVKRFN 352
           +R   A+++LKRGL+DLE +CDHTI  F+KE+  FN
Sbjct: 64  SRRDRAIDILKRGLEDLEGLCDHTIVTFEKEMAEFN 99


>AE014134-2838|AAF53606.1|  117|Drosophila melanogaster CG6840-PA
           protein.
          Length = 117

 Score = 44.0 bits (99), Expect = 6e-05
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +2

Query: 113 YVFRNESHTLGNSLKCIINKYDDVEFCGYTVPHPAESKMHFRIQ 244
           +    E HTLGN ++  + K  +V F GY VPHP E K   RIQ
Sbjct: 33  FTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQ 76


>BT001454-1|AAN71209.1|  136|Drosophila melanogaster GM15177p
           protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +2

Query: 170 KYDDVEFCGYTVPHPAESKMHFRIQ 244
           K  +V F GY VPHP E K   RIQ
Sbjct: 71  KDPNVLFAGYKVPHPLEHKFVIRIQ 95


>BT011368-1|AAR96160.1|  943|Drosophila melanogaster RE64037p
           protein.
          Length = 943

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 73  LRNVHSVTFYNHC 35
           LR VHSV +YNHC
Sbjct: 716 LRIVHSVDYYNHC 728


>AY058743-1|AAL13972.1|  769|Drosophila melanogaster LP08544p
           protein.
          Length = 769

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 73  LRNVHSVTFYNHC 35
           LR VHSV +YNHC
Sbjct: 542 LRIVHSVDYYNHC 554


>AE013599-148|AAM68345.1|  878|Drosophila melanogaster CG7843-PB,
           isoform B protein.
          Length = 878

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 73  LRNVHSVTFYNHC 35
           LR VHSV +YNHC
Sbjct: 712 LRIVHSVDYYNHC 724


>AE013599-147|AAM68344.1|  943|Drosophila melanogaster CG7843-PD,
           isoform D protein.
          Length = 943

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 73  LRNVHSVTFYNHC 35
           LR VHSV +YNHC
Sbjct: 716 LRIVHSVDYYNHC 728


>AE013599-146|AAM68343.1|  943|Drosophila melanogaster CG7843-PC,
           isoform C protein.
          Length = 943

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 73  LRNVHSVTFYNHC 35
           LR VHSV +YNHC
Sbjct: 716 LRIVHSVDYYNHC 728


>AE013599-145|AAF57281.2|  943|Drosophila melanogaster CG7843-PA,
           isoform A protein.
          Length = 943

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 73  LRNVHSVTFYNHC 35
           LR VHSV +YNHC
Sbjct: 716 LRIVHSVDYYNHC 728


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,570,282
Number of Sequences: 53049
Number of extensions: 334854
Number of successful extensions: 709
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)