Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11a03
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089415-1|AAL90153.1|  163|Drosophila melanogaster AT24025p pro...    47   3e-05
AE013599-1672|AAF58401.2|  312|Drosophila melanogaster CG12765-P...    47   3e-05
AY051665-1|AAK93089.1|  220|Drosophila melanogaster LD21457p pro...    35   0.12 
AE014297-4730|AAO41619.1|  295|Drosophila melanogaster CG1750-PB...    35   0.12 
AE014297-4729|AAF57138.2|  342|Drosophila melanogaster CG1750-PA...    35   0.12 

>AY089415-1|AAL90153.1|  163|Drosophila melanogaster AT24025p
           protein.
          Length = 163

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +1

Query: 574 VWYWLSQYIKPEDIGNFAGINKTTYALTKRESFWRSXYNRYC 699
           +W+ +S +I PED+  FA I K T  L    +FWR+ Y R+C
Sbjct: 65  IWFHISMHIDPEDVQTFALICKQTSRLVASRAFWRNLYRRHC 106


>AE013599-1672|AAF58401.2|  312|Drosophila melanogaster CG12765-PA
           protein.
          Length = 312

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +1

Query: 574 VWYWLSQYIKPEDIGNFAGINKTTYALTKRESFWRSXYNRYC 699
           +W+ +S +I PED+  FA I K T  L    +FWR+ Y R+C
Sbjct: 65  IWFHISMHIDPEDVQTFALICKQTSRLVASRAFWRNLYRRHC 106


>AY051665-1|AAK93089.1|  220|Drosophila melanogaster LD21457p
           protein.
          Length = 220

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +1

Query: 349 VNVKPKDAKPTDPLKLTKAEKVTADLT---WDELDAVDDIIEELGEDGSKNLVS 501
           ++V+ K+AKP D  +++ A K+T+ +T   W EL A++         G KNL +
Sbjct: 82  LSVRLKEAKPQDSSRVSYAPKITSKITEIIWSELSAIEIYTRHRALYGYKNLTT 135


>AE014297-4730|AAO41619.1|  295|Drosophila melanogaster CG1750-PB,
           isoform B protein.
          Length = 295

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +1

Query: 349 VNVKPKDAKPTDPLKLTKAEKVTADLT---WDELDAVDDIIEELGEDGSKNLVS 501
           ++V+ K+AKP D  +++ A K+T+ +T   W EL A++         G KNL +
Sbjct: 157 LSVRLKEAKPQDSSRVSYAPKITSKITEIIWSELSAIEIYTRHRALYGYKNLTT 210


>AE014297-4729|AAF57138.2|  342|Drosophila melanogaster CG1750-PA,
           isoform A protein.
          Length = 342

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +1

Query: 349 VNVKPKDAKPTDPLKLTKAEKVTADLT---WDELDAVDDIIEELGEDGSKNLVS 501
           ++V+ K+AKP D  +++ A K+T+ +T   W EL A++         G KNL +
Sbjct: 204 LSVRLKEAKPQDSSRVSYAPKITSKITEIIWSELSAIEIYTRHRALYGYKNLTT 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,136,072
Number of Sequences: 53049
Number of extensions: 498882
Number of successful extensions: 1300
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)