Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11a01
(265 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41678 Cluster: Capsid protein p24; n=14; Nucleopolyhed... 146 1e-34
UniRef50_Q8QLM2 Cluster: P24 capsid; n=4; Nucleopolyhedrovirus|R... 64 6e-10
UniRef50_Q0N3Z1 Cluster: P24; n=7; Nucleopolyhedrovirus|Rep: P24... 63 1e-09
UniRef50_Q77LW0 Cluster: P24capsid; n=5; Nucleopolyhedrovirus|Re... 56 2e-07
UniRef50_Q7T9V5 Cluster: P24-capsid; n=1; Adoxophyes orana granu... 52 3e-06
UniRef50_Q8JRZ6 Cluster: P24 capsid protein; n=1; Phthorimaea op... 48 3e-05
UniRef50_Q9PYW3 Cluster: ORF80; n=2; Granulovirus|Rep: ORF80 - X... 44 5e-04
UniRef50_Q91EY4 Cluster: ORF71 P24capsid; n=5; Granulovirus|Rep:... 39 0.019
UniRef50_Q91BB7 Cluster: P24 capsid; n=1; Spodoptera litura NPV|... 39 0.019
UniRef50_Q0IKY0 Cluster: P24 capsid protein; n=1; Leucania separ... 38 0.044
UniRef50_Q2SQA9 Cluster: Type II secretory pathway, pullulanase ... 37 0.10
UniRef50_Q8MN47 Cluster: Similar to Macaca fascicularis (Crab ea... 35 0.31
UniRef50_Q9PPZ5 Cluster: Unique hypothetical membrane lipoprotei... 35 0.41
UniRef50_Q6TS08 Cluster: Putative 23.4 kDa salivary protein; n=1... 33 0.95
UniRef50_Q4PAM8 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q1BBH2 Cluster: Integrase, catalytic region; n=21; Acti... 32 2.9
UniRef50_Q31JH2 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q965U6 Cluster: Putative uncharacterized protein; n=3; ... 31 3.8
UniRef50_Q95TU2 Cluster: LD23187p; n=6; Diptera|Rep: LD23187p - ... 31 6.7
UniRef50_A5UJV9 Cluster: Adhesin-like protein; n=1; Methanobrevi... 31 6.7
UniRef50_Q8A2T3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q5QUN9 Cluster: Rhodanese-related sulfurtransferase; n=... 30 8.8
UniRef50_Q4V217 Cluster: Possible monooxygenase; n=1; Bacillus c... 30 8.8
UniRef50_A3HSS0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_A7PYF6 Cluster: Chromosome chr15 scaffold_37, whole gen... 30 8.8
>UniRef50_P41678 Cluster: Capsid protein p24; n=14;
Nucleopolyhedrovirus|Rep: Capsid protein p24 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 198
Score = 146 bits (353), Expect = 1e-34
Identities = 66/74 (89%), Positives = 70/74 (94%)
Frame = +2
Query: 32 MKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWT 211
M TDAQSTSNT NFMYSPD++LEVVIITNSDGDHDGYLELTAAAK+MSPF+SNG S VWT
Sbjct: 1 MNTDAQSTSNTRNFMYSPDSSLEVVIITNSDGDHDGYLELTAAAKVMSPFLSNGSSAVWT 60
Query: 212 NAAPSHKLIKNNKN 253
NAAPSHKLIKNNKN
Sbjct: 61 NAAPSHKLIKNNKN 74
>UniRef50_Q8QLM2 Cluster: P24 capsid; n=4; Nucleopolyhedrovirus|Rep:
P24 capsid - Mamestra configurata NPV-A
Length = 228
Score = 64.1 bits (149), Expect = 6e-10
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = +2
Query: 71 FMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGG---STVWTNAAPSHKLIK 241
F Y D LEVVII N D D DGY+ELTAAAK+++P ++ G + +W N S +L +
Sbjct: 17 FQYD-DQTLEVVIIENGDDDRDGYIELTAAAKLLAPLVTIRGFSHAVLWANVISSQRLTR 75
Query: 242 NNKN 253
NNK+
Sbjct: 76 NNKH 79
>UniRef50_Q0N3Z1 Cluster: P24; n=7; Nucleopolyhedrovirus|Rep: P24 -
Clanis bilineata nucleopolyhedrosis virus
Length = 265
Score = 62.9 bits (146), Expect = 1e-09
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +2
Query: 71 FMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGG---STVWTNAAPSHKLIK 241
F Y D +EV+II N D D DGY+EL AA+I++P + G S +WTN PS +L++
Sbjct: 41 FKYDEDIVIEVLIIDNGDDDRDGYVELANAARIITPLTNVRGFNKSVLWTNTIPSQRLVR 100
Query: 242 NNKN 253
NN N
Sbjct: 101 NNIN 104
>UniRef50_Q77LW0 Cluster: P24capsid; n=5; Nucleopolyhedrovirus|Rep:
P24capsid - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 248
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +2
Query: 26 GIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGG--- 196
G + +T+ F Y D ++V I+ N++ D DG++ELTAA ++++P ++ G
Sbjct: 12 GTINDPIVNTNQQTQFQYDNDV-IDVFIVENNEDDRDGFVELTAAVRLLAPVVAIRGFNK 70
Query: 197 STVWTNAAPSHKLIKNNKN 253
S +W N SHKL ++ KN
Sbjct: 71 SVLWANVNNSHKLTRHGKN 89
>UniRef50_Q7T9V5 Cluster: P24-capsid; n=1; Adoxophyes orana
granulovirus|Rep: P24-capsid - Adoxophyes orana
granulovirus (AoGV)
Length = 156
Score = 52.0 bits (119), Expect = 3e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +2
Query: 68 NFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNN 247
+F YS +EV I++N D +GY E+ + A++++PFI + +W N PS+++ +N
Sbjct: 2 SFDYST-GQIEVFIVSNDDNTINGYAEVNSVAQLLTPFIRVTPTQIWNNTIPSYRIQNDN 60
Query: 248 KN 253
KN
Sbjct: 61 KN 62
>UniRef50_Q8JRZ6 Cluster: P24 capsid protein; n=1; Phthorimaea
operculella granulovirus|Rep: P24 capsid protein -
Phthorimaea operculella granulovirus
Length = 167
Score = 48.4 bits (110), Expect = 3e-05
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 95 LEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNNKN 253
+EV I++N D DGY+E+ A + +++PF G+ +W N ++K+ N KN
Sbjct: 11 IEVFIVSNEDKQVDGYVEVNALSHLLAPFTRITGTQLWNNTHAAYKIQNNGKN 63
>UniRef50_Q9PYW3 Cluster: ORF80; n=2; Granulovirus|Rep: ORF80 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 182
Score = 44.4 bits (100), Expect = 5e-04
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +2
Query: 89 NNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNNKN 253
N +EV I+TN +G +G+ E+++ A+++SP+ + +W + +K+ N KN
Sbjct: 20 NPIEVFIVTNDNGSTNGFAEVSSVAQMLSPYTRITTTQLWNSTPSCYKIQNNGKN 74
>UniRef50_Q91EY4 Cluster: ORF71 P24capsid; n=5; Granulovirus|Rep:
ORF71 P24capsid - Cydia pomonella granulosis virus
(CpGV) (Cydia pomonellagranulovirus)
Length = 203
Score = 39.1 bits (87), Expect = 0.019
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 95 LEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLIKNNKN 253
+EV I++N + +GY E++A ++SP+ + +W S+K+ N KN
Sbjct: 10 IEVFIVSNDEKGVNGYAEVSAVVHLLSPYTRITTTQLWNTVHASYKVQNNGKN 62
>UniRef50_Q91BB7 Cluster: P24 capsid; n=1; Spodoptera litura
NPV|Rep: P24 capsid - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 244
Score = 39.1 bits (87), Expect = 0.019
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = +2
Query: 71 FMYSPDNNLEVVIITNSDG-----DHDGYLELTAAAKIMSPFISN---GGSTVWTNAAPS 226
F Y +EV +I N G D D ++E+ + K+++P ++ + +W+ S
Sbjct: 12 FNYDEHEPIEVFVIENDLGGGAGVDTDSFVEIKSLCKLIAPLVNIRHFNPAMLWSTTQTS 71
Query: 227 HKLIKNNKN 253
H+LIKN KN
Sbjct: 72 HRLIKNGKN 80
>UniRef50_Q0IKY0 Cluster: P24 capsid protein; n=1; Leucania separata
nuclear polyhedrosis virus|Rep: P24 capsid protein -
Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 240
Score = 37.9 bits (84), Expect = 0.044
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Frame = +2
Query: 56 SNTHNFMYSPDN-NLEVVIITN-----SDGDHDGYLELTAAAKIMSPFISNGGST---VW 208
S++ F Y DN ++V II N ++ D D ++E+ +A +++SP ++ T +W
Sbjct: 2 SDSPQFQY--DNIKIDVFIIENRVEGYNEVDRDAFVEIKSACRLLSPLVTRPALTPAVLW 59
Query: 209 TNAAPSHKLIKNNKN 253
++ S +++KN+KN
Sbjct: 60 SHTPVSQRILKNDKN 74
>UniRef50_Q2SQA9 Cluster: Type II secretory pathway, pullulanase
PulA and related Glycosidase; n=2;
Gammaproteobacteria|Rep: Type II secretory pathway,
pullulanase PulA and related Glycosidase - Hahella
chejuensis (strain KCTC 2396)
Length = 1192
Score = 36.7 bits (81), Expect = 0.10
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 5 LSGCYKNGIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGY-LEL---TAAAKIM 172
L GC G K D TS+ + +Y+P + V+ D ++DG+ L L + AA
Sbjct: 24 LFGCSNGGGDKGDG--TSDGDDGLYTPTASQAVIYYKREDNNYDGWGLHLWSASGAAFSS 81
Query: 173 SPFISNGGSTVWTNAAPS 226
S +IS GG T W+N P+
Sbjct: 82 SEYIS-GGETSWSNPLPA 98
>UniRef50_Q8MN47 Cluster: Similar to Macaca fascicularis (Crab
eating macaque) (Cynomolgus monkey). Hypothetical 49.3
kDa protein; n=2; Dictyostelium discoideum|Rep: Similar
to Macaca fascicularis (Crab eating macaque) (Cynomolgus
monkey). Hypothetical 49.3 kDa protein - Dictyostelium
discoideum (Slime mold)
Length = 998
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 47 QSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPS 226
+STS T N + +NN + N++ +++G +++ ++PF G PS
Sbjct: 386 RSTSMTSNVNNNNNNNANNNNVNNNNNNNNGPNSISSLIANVNPFTEEGRLQSLNKPCPS 445
Query: 227 HKLIKNNKN 253
+L+ NN N
Sbjct: 446 FQLVNNNNN 454
>UniRef50_Q9PPZ5 Cluster: Unique hypothetical membrane lipoprotein;
n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 5005
Score = 34.7 bits (76), Expect = 0.41
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = +2
Query: 23 NGIMKTDAQSTSNTHNF-----MYSPDNNLEVVIITNSDG---DHDGYLELTAAAKIMSP 178
N ++ + +T+ T+ F + S NNL V + N + D +E +
Sbjct: 1903 NNVVYDASVNTTQTYVFTNKFAIASFSNNLTDVDVANKQNISINLDSRVETIQGYHFKAK 1962
Query: 179 FISNGGSTVWTNAAPSHKLIKNNKN 253
+ISN VWTN P+ I NNKN
Sbjct: 1963 YISNDNRVVWTNTIPAPTNIGNNKN 1987
>UniRef50_Q6TS08 Cluster: Putative 23.4 kDa salivary protein; n=1;
Culex pipiens quinquefasciatus|Rep: Putative 23.4 kDa
salivary protein - Culex quinquefasciatus (Southern
house mosquito)
Length = 222
Score = 33.5 bits (73), Expect = 0.95
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 5 LSGCYKNGIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFI 184
LS CYK + + ++ S NF PDN L+ + TN G+H L A + F+
Sbjct: 81 LSKCYKITNLANE-KTLSAGQNF--DPDNQLKFAVATNKSGEHSQDLWTMELAYGATYFL 137
Query: 185 SNGGSTVWTNAAPSHK 232
N ++ + P++K
Sbjct: 138 KNRHTSEYLKVNPNNK 153
>UniRef50_Q4PAM8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1267
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 38 TDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNA 217
T + ST ++ + +Y+PDNN+ V +SD H + ++AA + + +A
Sbjct: 21 TYSDSTLSSSSLLYTPDNNMVNVKQESSDRLHHDHTSISAANAAFASAAKRSDANTTGDA 80
Query: 218 APSHKLI 238
H L+
Sbjct: 81 TDDHSLL 87
>UniRef50_Q1BBH2 Cluster: Integrase, catalytic region; n=21;
Actinomycetales|Rep: Integrase, catalytic region -
Mycobacterium sp. (strain MCS)
Length = 358
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +1
Query: 25 RDYENGRPVDIEHAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVT 177
R YE+ P + H + F+ GGGH + SR G NRRR H T
Sbjct: 150 RRYEHAHPGSLIHVDVTKFANIPDGGGHKF----LSREHGGRNRRRTAHRT 196
>UniRef50_Q31JH2 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira crunogena XCL-2|Rep: Putative
uncharacterized protein - Thiomicrospira crunogena
(strain XCL-2)
Length = 1597
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 23 NGIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLE 148
NG A+ +F+Y DN +V II N D + D Y+E
Sbjct: 1471 NGGDTATAEVNDAGDHFLYGLDNEDDVFIIENEDDEQDSYIE 1512
>UniRef50_Q965U6 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 425
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 43 RPVDIEHAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QR--RFDRVDQR 216
R +D+ H VF+R+ GG + G ++ L +RRR R R+D +D R
Sbjct: 64 RQIDVSHISSMVFNREMDGGIERNRLGSQAILLDENSRRRNPQFKSIALRSLRYDHIDHR 123
>UniRef50_Q95TU2 Cluster: LD23187p; n=6; Diptera|Rep: LD23187p -
Drosophila melanogaster (Fruit fly)
Length = 970
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 ENGRPVDIE--HAQLHVFSRQQSGGGHHYQFGRRSRWLFGTNRRRQNHVTFY*QRRFDRV 207
E RP + + H Q +S + G + GRR R+ FG ++ TF + D +
Sbjct: 819 EKNRPSNTKMAHLQAKNYSIEDKAAGEDEKVGRRDRFHFGPITDFKDKETFKPNVKLDYI 878
Query: 208 DQRGAIAQI 234
D G I +
Sbjct: 879 DDNGRILNL 887
>UniRef50_A5UJV9 Cluster: Adhesin-like protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Adhesin-like
protein - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 1049
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 23 NGIMKTDAQSTSNTHNFMYS-PDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGS 199
NG+ ST+ ++ +Y+ NLE++ T YL+ I I N +
Sbjct: 152 NGLTMISLNSTTYSNAVLYAYQSKNLEIINNTIIGSSWGIYLQTCVNTTINQNTIKNQAT 211
Query: 200 TVWTNAAPSHKLIKNNK 250
T N + +IKNNK
Sbjct: 212 TGILNFGSAKSIIKNNK 228
>UniRef50_Q8A2T3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 310
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 17 YKNGIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHD 136
Y+N ++K A STS +F+ S +++++ +DG+ D
Sbjct: 56 YENALLKVSAMSTSEQVSFLNSLSFKSQMILMQEADGELD 95
>UniRef50_Q5QUN9 Cluster: Rhodanese-related sulfurtransferase; n=1;
Idiomarina loihiensis|Rep: Rhodanese-related
sulfurtransferase - Idiomarina loihiensis
Length = 101
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 56 SNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSH 229
SN F+ S D N +V+++ G + A +GG T W+ + P H
Sbjct: 40 SNLPQFLSSVDKNQKVIVVCYHGISSQGAADYIAGNGFTDVHSMDGGYTAWSMSFPEH 97
>UniRef50_Q4V217 Cluster: Possible monooxygenase; n=1; Bacillus
cereus E33L|Rep: Possible monooxygenase - Bacillus
cereus (strain ZK / E33L)
Length = 404
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 95 LEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVWTNAAPSHKLI 238
L++ + T++ DG + + AA I SPF G S +A +H +I
Sbjct: 269 LDIQVATSNQWVQDGLMLIGDAAHIASPFSGQGNSLAIQDAVVAHDVI 316
>UniRef50_A3HSS0 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 1133
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 44 AQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMSPFISNGGSTVW 208
A NTH F + NNL I ++DGDH G E ++ NG T W
Sbjct: 288 AMGVRNTHEFTFDQYNNL---ISVDNDGDHGGESERLV-------YLVNGSDTGW 332
>UniRef50_A7PYF6 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 270
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 20 KNGIMKTDAQSTSNTHNFMYSPDNNLEVVIITNSDGDHDGYLELTAAAKIMS 175
K GI D Q + TH+F ++ +++ +SDG DG L L KI+S
Sbjct: 202 KGGITLRDLQRMAYTHDFTWTDKEMADMIHCFDSDG--DGKLSLEDFQKIVS 251
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,341,706
Number of Sequences: 1657284
Number of extensions: 5977393
Number of successful extensions: 16332
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 16021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16321
length of database: 575,637,011
effective HSP length: 65
effective length of database: 467,913,551
effective search space used: 10294098122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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