Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11a01
         (265 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   0.73 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   5.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    19   9.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    19   9.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    19   9.0  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 0.73
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 95  LEVVIITNSDGDHDGYLELTAAAKIMSPFISN 190
           ++V+     DG H GY++  A A +  P +++
Sbjct: 1   MDVLQKNYDDGIHPGYMDGGAGAGLYEPHVAH 32


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 78  YMKLCVFDVDWASVF 34
           + ++C F  DW  VF
Sbjct: 296 FNEICEFTGDWTRVF 310


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 252 FLLFLINLCDGAALVHT 202
           FLL L  L +G  L HT
Sbjct: 143 FLLTLSALLEGFTLYHT 159


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 252 FLLFLINLCDGAALVHT 202
           FLL L  L +G  L HT
Sbjct: 143 FLLTLSALLEGFTLYHT 159


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 252 FLLFLINLCDGAALVHT 202
           FLL L  L +G  L HT
Sbjct: 143 FLLTLSALLEGFTLYHT 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,206
Number of Sequences: 336
Number of extensions: 1352
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4271720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)