Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc10p22
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl t... 89 4e-18
U41034-7|AAN72427.1| 465|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U41034-6|AAU05557.1| 538|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U41034-5|AAA82381.1| 567|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 29 3.3
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 28 7.7
>AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl trna
synthetase protein2 protein.
Length = 551
Score = 88.6 bits (210), Expect = 4e-18
Identities = 69/169 (40%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Frame = +1
Query: 136 MCGIWATFGVTGGLTPTCVKCFSNIRHRGPDAWRIEQDAREPLAILGFQRLAIV--DGRH 309
MCGIWA G +TP F I RGPD +E+ +P LGF RLAIV
Sbjct: 1 MCGIWAIIGEQ--VTPQQQDAFMKIVGRGPDLTVLEEV--QPNVHLGFHRLAIVMPGDTP 56
Query: 310 GMQPMRLHCYPRTTLICNGEIYNCKRLQKQHEFQYETN-CDVEAIIHLYQRFG--IEEAV 480
QP+ +++CNGEIYN + L+ F + D AII + + ++EA
Sbjct: 57 SAQPI---VGGGLSVVCNGEIYNHQSLKIDCPFTLKNGGSDCAAIITSFIKHNKDLKEAC 113
Query: 481 TNLDGVFSFCLVDGEKNKVYIARDPYGVRPLFSFHDPENDVLAICSEAK 627
+LDGVF+F + D +KN VYI RDP GVRPLF ++ N L I SE K
Sbjct: 114 ASLDGVFAFIMAD-DKN-VYIGRDPIGVRPLFYGYN-SNGSLLIGSEVK 159
>U41034-7|AAN72427.1| 465|Caenorhabditis elegans Hypothetical
protein M02D8.4b protein.
Length = 465
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Frame = +1
Query: 214 HRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRTTLICNGEIYNCKRLQ 393
HRGPD QD + IL +RLAI+D +QP++ P +I NGEIYN + L+
Sbjct: 32 HRGPDFSGCYQDTKTG-DILVHERLAIMD-LGVVQPLQ-GTAPNRQVIHNGEIYNHQELR 88
Query: 394 KQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL-VDGEKNKVYIARDPYGV 564
++ +T+CD E II LY+++ LDGVF+F L DG+ ARDP GV
Sbjct: 89 DTELKKYNLKTHCDSEVIIFLYEKYRDGHICNLLDGVFAFVLCCDGD---FLAARDPLGV 145
Query: 565 RPLF 576
+ ++
Sbjct: 146 KQMY 149
>U41034-6|AAU05557.1| 538|Caenorhabditis elegans Hypothetical
protein M02D8.4c protein.
Length = 538
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Frame = +1
Query: 214 HRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRTTLICNGEIYNCKRLQ 393
HRGPD QD + IL +RLAI+D +QP++ P +I NGEIYN + L+
Sbjct: 32 HRGPDFSGCYQDTKTG-DILVHERLAIMD-LGVVQPLQ-GTAPNRQVIHNGEIYNHQELR 88
Query: 394 KQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL-VDGEKNKVYIARDPYGV 564
++ +T+CD E II LY+++ LDGVF+F L DG+ ARDP GV
Sbjct: 89 DTELKKYNLKTHCDSEVIIFLYEKYRDGHICNLLDGVFAFVLCCDGD---FLAARDPLGV 145
Query: 565 RPLF 576
+ ++
Sbjct: 146 KQMY 149
>U41034-5|AAA82381.1| 567|Caenorhabditis elegans Hypothetical
protein M02D8.4a protein.
Length = 567
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Frame = +1
Query: 214 HRGPDAWRIEQDAREPLAILGFQRLAIVDGRHGMQPMRLHCYPRTTLICNGEIYNCKRLQ 393
HRGPD QD + IL +RLAI+D +QP++ P +I NGEIYN + L+
Sbjct: 32 HRGPDFSGCYQDTKTG-DILVHERLAIMD-LGVVQPLQ-GTAPNRQVIHNGEIYNHQELR 88
Query: 394 KQH--EFQYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL-VDGEKNKVYIARDPYGV 564
++ +T+CD E II LY+++ LDGVF+F L DG+ ARDP GV
Sbjct: 89 DTELKKYNLKTHCDSEVIIFLYEKYRDGHICNLLDGVFAFVLCCDGD---FLAARDPLGV 145
Query: 565 RPLF 576
+ ++
Sbjct: 146 KQMY 149
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 438 GFDITVCFILKLMLFL*AFTVVNLTITD*RSARVTV*AHRLHTVPTVHDS 289
GF I VC K+ LF+ AF VVNL T V H ++ V T+ +S
Sbjct: 439 GF-IRVCDFSKISLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIGES 487
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical
protein F57F5.2 protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 438 GFDITVCFILKLMLFL*AFTVVNLTITD*RSARVTV*AHRLHTVPTVHDS 289
GF I VC K+ LF+ AF VVNL T V H ++ V T+ +S
Sbjct: 439 GF-IRVCDFSKISLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIGES 487
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 438 GFDITVCFILKLMLFL*AFTVVNLTITD*RSARVTV*AHRLHTVPTVHDS 289
GF I VC K+ LF+ AF VVNL T V H ++ V T+ +S
Sbjct: 439 GF-IRVCDFSKISLFIEAFEVVNLLNTIYSHLDSIVDTHGVYKVETIGES 487
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
protein D2085.1 protein.
Length = 2198
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 371 FTTVNAYRNSMSFNMKQTVM 430
+TT N N +SFNMK VM
Sbjct: 919 YTTFNGIENDVSFNMKNAVM 938
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resistance
protein familyprotein 6 protein.
Length = 1396
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 409 QYETNCDVEAIIHLYQRFGIEEAVTNLDGVFSFCL 513
Q + C A+IH + I+EA N+DGV C+
Sbjct: 1274 QRQLFCLARAMIHRSKILVIDEATANVDGVTDACI 1308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,605,047
Number of Sequences: 27780
Number of extensions: 352218
Number of successful extensions: 871
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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