Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10p14
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   2.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   9.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.5  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   9.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.5  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 568 KSRLQHAYRHVAVVVFVDQLGQTVFFVSFNRLFI 467
           + R +   RH+  V ++D++ + VF  SF  L I
Sbjct: 452 RKRGEKIARHINSVSYIDKVARIVFPASFGLLNI 485


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 234 LNIMRTGFVNCVFIILLMYTNSLVCSST*QSRITVWDTS 118
           LN M +  V C  + LLM TN  +      +  T  DT+
Sbjct: 691 LNTMESHEVRCTAVFLLMKTNPPLSMLQRMAEFTKLDTN 729


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 237 MLNIMRTGFVNCVFIILLMYTNSLVC 160
           +L+++  GF+  + I L +  N LVC
Sbjct: 22  LLSVLLVGFLFLILIFLSVAGNILVC 47


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = +2

Query: 272 NDLRDRIKSKVDEQFDQLEREYSDKID 352
           ND R R+++ ++   ++ +REY  +++
Sbjct: 404 NDARRRVEAALEAVEEERQREYGIRVE 430


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 680 LAYVDSVEFDGKQFEE 727
           L YVD+ +F   Q+EE
Sbjct: 278 LYYVDTEQFSNPQYEE 293


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 241 GSYTKRYAQEQRFARQN 291
           G Y KRY    +FA+ N
Sbjct: 109 GEYKKRYEHGLQFAKNN 125


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 218 RVLSIACS*SC*CTPTLWFVRPH 150
           RV+   CS +C     L  VRPH
Sbjct: 236 RVIPQVCSGNCKLNDILLTVRPH 258


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 241 GSYTKRYAQEQRFARQN 291
           G Y KRY    +FA+ N
Sbjct: 109 GEYKKRYEHGLQFAKNN 125


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 218 RVLSIACS*SC*CTPTLWFVRPH 150
           RV+   CS +C     L  VRPH
Sbjct: 236 RVIPQVCSGNCKLNDILLTVRPH 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,413
Number of Sequences: 438
Number of extensions: 4442
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)