Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10p08
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical p...   101   4e-22
Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical p...   101   4e-22
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...   101   4e-22
Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical pr...    34   0.090
U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    31   1.1  
Z93397-5|CAD89745.1|  375|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical
           protein W02B12.15b protein.
          Length = 134

 Score =  101 bits (243), Expect = 4e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +2

Query: 314 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 493
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127

Query: 494 VVR 502
           +V+
Sbjct: 128 IVK 130


>Z66521-17|CAI46628.1|  103|Caenorhabditis elegans Hypothetical
           protein W02B12.15a protein.
          Length = 103

 Score =  101 bits (243), Expect = 4e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +2

Query: 314 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 493
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 37  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 96

Query: 494 VVR 502
           +V+
Sbjct: 97  IVK 99


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score =  101 bits (243), Expect = 4e-22
 Identities = 40/63 (63%), Positives = 50/63 (79%)
 Frame = +2

Query: 314 SGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPV 493
           S + N  I+ D NK+VD +DIEDI EK + CRCW+S+ WPYCDGSHG HNKETGDN GP+
Sbjct: 68  SARCNYKIQLDSNKIVDTVDIEDIGEKKAFCRCWKSEKWPYCDGSHGKHNKETGDNVGPL 127

Query: 494 VVR 502
           +V+
Sbjct: 128 IVK 130


>Z34802-9|CAB54281.3|  160|Caenorhabditis elegans Hypothetical
           protein M88.7 protein.
          Length = 160

 Score = 34.3 bits (75), Expect = 0.090
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 KVVDFIDIEDITEKASLCRCWRSKNWPYCDGSH 451
           K V FI  +D+T    LC C ++ N P+CDGSH
Sbjct: 116 KPVRFIPDKDMT--VWLCNCKQTNNRPFCDGSH 146


>U80839-8|AAB37914.1|  238|Caenorhabditis elegans Hypothetical
           protein ZC204.10 protein.
          Length = 238

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +3

Query: 618 LRKCLKRNALYNIISVLFISYKT 686
           LRKCLKR ++  +IS+ F+S KT
Sbjct: 16  LRKCLKRMSVAQLISISFLSKKT 38


>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 213 protein.
          Length = 1437

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 394 LLSYILN-VNKVHNFINVLPDTRVYLTTASFSGFFYCLV 281
           +LSY+L+ V    NFI  + D+  YLT+  F    YC++
Sbjct: 560 VLSYLLSQVQTFDNFIGPVVDSLRYLTSLEFDVLTYCII 598


>Z93397-5|CAD89745.1|  375|Caenorhabditis elegans Hypothetical
           protein ZC482.8 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 376 NVNKVHNFINVLPD-TRVYLTTASFSGFFYCLVRVVRYT 263
           N++K    + VL D T+     ASFSGFF  LV +V  T
Sbjct: 32  NLHKHFELVTVLTDVTKQLYDIASFSGFFLNLVHLVILT 70


>Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical
           protein F57A8.5 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 153 PFPTICRACRFQILLADGFVLEL 221
           P+P  C++CRFQ  L  G  LE+
Sbjct: 65  PYPLKCQSCRFQRCLDAGMYLEV 87


>Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical
           protein T22H2.6b protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 521 IQINSKCSFQKNYVKTNYCIVLFKIKHF 604
           I  NSK   +KN V+  +CI+ F IK+F
Sbjct: 6   INQNSKHITKKNDVRIFFCILYFNIKYF 33


>Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical
           protein T22H2.6a protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 521 IQINSKCSFQKNYVKTNYCIVLFKIKHF 604
           I  NSK   +KN V+  +CI+ F IK+F
Sbjct: 6   INQNSKHITKKNDVRIFFCILYFNIKYF 33


>AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical
           protein F08F1.3 protein.
          Length = 226

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 59  Y*TNIRRA*LHFLVCFAKSLKMYVVSNLVKVTIPNYLSSLPIP 187
           Y  NIR    HF +CF    K+     + KV +PN   +LP+P
Sbjct: 174 YFDNIRN---HFPLCFVFDSKIADKYAISKVHLPNNFLTLPVP 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,065,238
Number of Sequences: 27780
Number of extensions: 335086
Number of successful extensions: 854
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)