Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10p04
         (705 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129...    32   0.39 
02_02_0469 + 10691648-10691692,10691755-10691907,10692043-106920...    31   1.2  
01_06_0549 + 30149016-30149761,30149922-30150088,30150236-301503...    31   1.2  
11_01_0455 + 3517281-3519798,3519888-3520261                           30   2.1  
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008...    29   4.8  
03_02_0922 - 12417328-12417816,12417929-12418399,12418568-124186...    28   8.3  

>09_04_0005 +
           13612060-13612291,13612381-13612510,13612726-13612926,
           13613086-13613185,13613513-13613559,13613871-13613964,
           13614042-13614192,13614777-13614923,13614994-13615067,
           13615288-13615376,13615840-13615954,13616104-13616301
          Length = 525

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
 Frame = +1

Query: 433 GWVVVASAFLVSACVDGL-AFSFGLLH---EEFTRY--FETTQSQTSLIGSLFIATPLLA 594
           GW+ V    L ++  + L  +  G+++   E+  R   F+       L+ S+FI      
Sbjct: 98  GWLRVFPHVLTASMANFLFGYHIGVMNGPIEDIARELGFQGNPFLQGLVVSIFIVGAFFG 157

Query: 595 GPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSV 705
              +SA+VD FGC+    I  +   +G LL+A ++S+
Sbjct: 158 SLGSSALVDNFGCKRTLQIDSIPLILGALLSAQADSL 194


>02_02_0469 + 10691648-10691692,10691755-10691907,10692043-10692093,
            10692162-10692224,10692327-10693031,10693128-10693223,
            10693307-10695547
          Length = 1117

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 552  CLRLCRFEISCELFVQESERESETINTGGYEEGRGNDHP 436
            C ++C  E  C +F+QE ++  E + T   E  + ND+P
Sbjct: 1052 CPKICHDEAKCSIFMQELDKIQEKLITESRENAQ-NDNP 1089


>01_06_0549 +
           30149016-30149761,30149922-30150088,30150236-30150320,
           30150499-30150658
          Length = 385

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 482 PSTQADTRKAEATTTHPQPPSGIGGSFFWND 390
           PS+ A +R +  TTT P P +      +WND
Sbjct: 132 PSSPAPSRSSATTTTRPAPTTTATADGYWND 162


>11_01_0455 + 3517281-3519798,3519888-3520261
          Length = 963

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 502 LLHEE-FTRYFETTQSQTSLIGSLFIATPLLAGPIASAI 615
           LLHE  FT +  T+ S  S++GSL++    + GP+ +++
Sbjct: 369 LLHENMFTGFIPTSLSNLSVLGSLWLDYNKIGGPLPASL 407


>07_03_1486 +
           26899479-26899549,26899861-26899989,26900649-26900834,
           26901025-26901247,26901662-26901666,26901796-26901924,
           26902697-26902894,26903138-26903356,26903461-26903699,
           26903797-26903888,26904009-26904224,26904327-26904554,
           26904631-26904722,26904806-26904899,26905475-26905567,
           26905667-26906640,26906727-26906841,26907135-26908895
          Length = 1687

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -1

Query: 501 SERESETINTGGYEEGRGNDHPSPAPIRYRRQFFL 397
           S++E+   N+GG+   RG+ HP P+ +  +R+F L
Sbjct: 804 SQKEALASNSGGFALTRGHVHPQPS-LLVKREFGL 837


>03_02_0922 -
           12417328-12417816,12417929-12418399,12418568-12418663,
           12418746-12418927,12419027-12419486
          Length = 565

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -1

Query: 504 ESERESETINTGGYEEGRGNDHPSPAPIRYRRQFFL 397
           E E   E    GG   G G DHP P P    R  F+
Sbjct: 42  EGEWRPEEEEEGGKGGGGGGDHPGPKPRPAERGLFV 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,716,289
Number of Sequences: 37544
Number of extensions: 287075
Number of successful extensions: 1053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)